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The map label for this gene is yciH [C]

Identifier: 148827065

GI number: 148827065

Start: 333474

End: 333794

Strand: Reverse

Name: yciH [C]

Synonym: CGSHiGG_01880

Alternate gene names: 148827065

Gene position: 333794-333474 (Counterclockwise)

Preceding gene: 148827066

Following gene: 148827056

Centisome position: 17.69

GC content: 35.83

Gene sequence:

>321_bases
ATGTCAGATTCTGTTTTAGTGTATTCTACAGATGTAGGTCGAATTAAAGAGGAAAAATTGACTGTAGCTCGCCCAAAAGG
AGACGGTGTTGTACGTATCCAAAAACAAACGAGTGGTAGAAAAGGTGCTGGCGTATCAGTTATAACTGGTTTAGATTTAT
CTGATGAGGAATTGAAAAAATTAGCGGCTGAATTAAAAAAACGTTGTGGATGTGGTGGAGCAGTTAAAAATGGTATTATT
GAAATTCAAGGGGAAAAACGAGATTTGCTCAAGCAATTATTAGAGCAAAAAGGGTTTAAAGTTAAATTATCAGGTGGATG
A

Upstream 100 bases:

>100_bases
TGCAGGTTCAGATTATTTAGTTATTGGACGCCCAATAACTCAAGCGGATAATCCTGCGGAGGTTCTCCGTTCTATTAATG
TATCTATTGGGTAATCATAA

Downstream 100 bases:

>100_bases
TTAAAAAGGCGAATTAGCGCCTTTTTTGTTAGAGATTCAAAATTTCTTTGACGAAAGGAATCGTAAGATTTCGTTGAGCT
TGTAATGATGCTTTATCTAG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSDSVLVYSTDVGRIKEEKLTVARPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGGAVKNGII
EIQGEKRDLLKQLLEQKGFKVKLSGG

Sequences:

>Translated_106_residues
MSDSVLVYSTDVGRIKEEKLTVARPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGGAVKNGII
EIQGEKRDLLKQLLEQKGFKVKLSGG
>Mature_105_residues
SDSVLVYSTDVGRIKEEKLTVARPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGGAVKNGIIE
IQGEKRDLLKQLLEQKGFKVKLSGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=105, Percent_Identity=75.2380952380952, Blast_Score=154, Evalue=8e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11354; Mature: 11223

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVLVYSTDVGRIKEEKLTVARPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKK
CCCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHH
LAAELKKRCGCGGAVKNGIIEIQGEKRDLLKQLLEQKGFKVKLSGG
HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure 
SDSVLVYSTDVGRIKEEKLTVARPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKK
CCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHH
LAAELKKRCGCGGAVKNGIIEIQGEKRDLLKQLLEQKGFKVKLSGG
HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]