Click here to switch to the map view.

The map label for this gene is yicG [C]

Identifier: 148827051

GI number: 148827051

Start: 313996

End: 314658

Strand: Direct

Name: yicG [C]

Synonym: CGSHiGG_01810

Alternate gene names: 148827051

Gene position: 313996-314658 (Clockwise)

Preceding gene: 148827049

Following gene: 148827052

Centisome position: 16.64

GC content: 42.99

Gene sequence:

>663_bases
ATGTTACTTAGTATTTTATATATCATCGGTATCACCGCTGAAGGAATGACAGGCGCACTTGCGGCAGGTCGTGAGAAAAT
GGATATTTTTGGCGTGATCATTATCGCATCTGTCACTGCCATTGGTGGCGGTTCTGTGCGTGATGTACTGCTTGGGCATT
ATCCTCTCGGCTGGGTTAAGCACCCAGAATATTTTTTAATGGTGGCAAGTGCGGCGGTAATTACCGTATATGTTGCACCA
TTTATCAATCATTTTATGCGCTACTTTCGCACTATTTTCTTGGTGCTTGATGCGATGGGCTTAGTGGTGTATTCCATTAT
TGGCGCACAAATTGCAATGGATATGGGACATAGCCTCACTATTGTTTGTATTGCAGGTTGTATTACGGGCGCCTTTGGCG
GGGTTCTACGCGATATGCTATGCAATCGAATTCCTCTCGTATTCCAAAAAGAACTCTATGCCAGCATTGCGCTATTTGCC
ACGCTGACTTATTACGCATTAAGCACACTTCAAGTAGAACATACGCTTGCCGTGTTACTCACACTTATTAGCAGCTTTAC
TTTACGCCTTTTAGCTATTCATTTCGAATGGGGGTTGCCGGTGTTTAATTACCAAGAACTCACATCGGAAGAACAAGATA
AGCTGCCAAATAAAAAGAAATAA

Upstream 100 bases:

>100_bases
CATAATTTTGACGTCTGAAAAAATAATGCGCCATTATGCTAAAAATTCATTAAATTTTAAAGTAAAATGAAACCAATTTT
AACCGCACTTAGGTACATGA

Downstream 100 bases:

>100_bases
ATACAATAAAGGGAATAACTATGTTAGAACAAATGGGTAAACAAGCCAAAGATGCTGCATTTATCTTGGCTCAACTCACC
ACTGCTGAAAAAAATTGTGC

Product: bicyclomycin/multidrug efflux system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLLSILYIIGITAEGMTGALAAGREKMDIFGVIIIASVTAIGGGSVRDVLLGHYPLGWVKHPEYFLMVASAAVITVYVAP
FINHFMRYFRTIFLVLDAMGLVVYSIIGAQIAMDMGHSLTIVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFA
TLTYYALSTLQVEHTLAVLLTLISSFTLRLLAIHFEWGLPVFNYQELTSEEQDKLPNKKK

Sequences:

>Translated_220_residues
MLLSILYIIGITAEGMTGALAAGREKMDIFGVIIIASVTAIGGGSVRDVLLGHYPLGWVKHPEYFLMVASAAVITVYVAP
FINHFMRYFRTIFLVLDAMGLVVYSIIGAQIAMDMGHSLTIVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFA
TLTYYALSTLQVEHTLAVLLTLISSFTLRLLAIHFEWGLPVFNYQELTSEEQDKLPNKKK
>Mature_220_residues
MLLSILYIIGITAEGMTGALAAGREKMDIFGVIIIASVTAIGGGSVRDVLLGHYPLGWVKHPEYFLMVASAAVITVYVAP
FINHFMRYFRTIFLVLDAMGLVVYSIIGAQIAMDMGHSLTIVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFA
TLTYYALSTLQVEHTLAVLLTLISSFTLRLLAIHFEWGLPVFNYQELTSEEQDKLPNKKK

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=206, Percent_Identity=62.621359223301, Blast_Score=242, Evalue=2e-65,
Organism=Escherichia coli, GI1786352, Length=207, Percent_Identity=32.8502415458937, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 24186; Mature: 24186

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSILYIIGITAEGMTGALAAGREKMDIFGVIIIASVTAIGGGSVRDVLLGHYPLGWVK
CHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
HPEYFLMVASAAVITVYVAPFINHFMRYFRTIFLVLDAMGLVVYSIIGAQIAMDMGHSLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFATLTYYALSTLQVEHTLAVLL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLISSFTLRLLAIHFEWGLPVFNYQELTSEEQDKLPNKKK
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCCCCC
>Mature Secondary Structure
MLLSILYIIGITAEGMTGALAAGREKMDIFGVIIIASVTAIGGGSVRDVLLGHYPLGWVK
CHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
HPEYFLMVASAAVITVYVAPFINHFMRYFRTIFLVLDAMGLVVYSIIGAQIAMDMGHSLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFATLTYYALSTLQVEHTLAVLL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLISSFTLRLLAIHFEWGLPVFNYQELTSEEQDKLPNKKK
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]