Click here to switch to the map view.

The map label for this gene is 148827011

Identifier: 148827011

GI number: 148827011

Start: 252848

End: 253633

Strand: Direct

Name: 148827011

Synonym: CGSHiGG_01495

Alternate gene names: NA

Gene position: 252848-253633 (Clockwise)

Preceding gene: 148827010

Following gene: 148827012

Centisome position: 13.4

GC content: 39.31

Gene sequence:

>786_bases
ATGTATTTAATCGAAACCTATTTTCGCCTGACTGCGCTCGAAAATAATATTGAATCACAAAGTCGTTTACTCAATGCAGT
GATCGATCAATGGCGGTATAACGGGCAAATTATCGGACGTGAAATTCCTTTATATTTAGCGGAAGAAGATGGCACACAAG
GTTTTGCTATGCGTGTCATTTGCCCTGAGCAAGATAGTCTTTTCCCGCAAAATAATAACGCAGAAGTGAATCGAGCATTA
CAAGAAGCCGAAAAGTGCGGCGTAATTTTTGATGGTTTTCAACTTGTGGGTGATGATTTCAATTCAGATCAAACAGCAGA
AAATACATCGCCAGCTTGGCAAGTGCTTTACACAACCCATTTACAAAGTTGCTCGCCGATTCATAGTGGAGAAAATCTCG
CACCAATTCCGTTGTATAAACAGTTGAAAAATCAACCGCACTTAAGCCAAGATCTGATTAAATGGCAAGAAAATTGGCAA
GCCTGCGATCAACTACAAATGAATGGTGCGGTATTAGAACAACAATCTTTGGCAGAAATTTCGGAGCACCAAAGCACACT
TTCAAAACACGGACGATATTTAGCTCAAGAAATAGCAAAAGAAACCGGCATACCGACTTACTATTATTTATATCGTGTAG
GTGGGCAATCTTTAGAATCTGAAAAATCCCGTTGCTGCCCTTCTTGTGGTGCAAATTGGGCGTTAAAAAACGCGATTTTT
GATACCTTTCATTTTAAATGCGATACCTGTCGATTAGTTTCGAATCTATCGTGGAATTTTTTGTAA

Upstream 100 bases:

>100_bases
TTGATATTATTGCCTTTTTTAGCGAACTCGGCATTTCACAACGTTTAAGTGAAATGCGTTTAAACGGCTTAAACCAAATC
GGACAGCAATTAAAAAATTT

Downstream 100 bases:

>100_bases
TTTAAGTCTATGCCTCAACTCTCTGTTGGAATGATAAAGTCTTAGCCCCCTTCCGACGCTTCGCGCCACCTTCCCCCCGC
AAGCAAGGGAAGGCAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MYLIETYFRLTALENNIESQSRLLNAVIDQWRYNGQIIGREIPLYLAEEDGTQGFAMRVICPEQDSLFPQNNNAEVNRAL
QEAEKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTHLQSCSPIHSGENLAPIPLYKQLKNQPHLSQDLIKWQENWQ
ACDQLQMNGAVLEQQSLAEISEHQSTLSKHGRYLAQEIAKETGIPTYYYLYRVGGQSLESEKSRCCPSCGANWALKNAIF
DTFHFKCDTCRLVSNLSWNFL

Sequences:

>Translated_261_residues
MYLIETYFRLTALENNIESQSRLLNAVIDQWRYNGQIIGREIPLYLAEEDGTQGFAMRVICPEQDSLFPQNNNAEVNRAL
QEAEKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTHLQSCSPIHSGENLAPIPLYKQLKNQPHLSQDLIKWQENWQ
ACDQLQMNGAVLEQQSLAEISEHQSTLSKHGRYLAQEIAKETGIPTYYYLYRVGGQSLESEKSRCCPSCGANWALKNAIF
DTFHFKCDTCRLVSNLSWNFL
>Mature_261_residues
MYLIETYFRLTALENNIESQSRLLNAVIDQWRYNGQIIGREIPLYLAEEDGTQGFAMRVICPEQDSLFPQNNNAEVNRAL
QEAEKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTHLQSCSPIHSGENLAPIPLYKQLKNQPHLSQDLIKWQENWQ
ACDQLQMNGAVLEQQSLAEISEHQSTLSKHGRYLAQEIAKETGIPTYYYLYRVGGQSLESEKSRCCPSCGANWALKNAIF
DTFHFKCDTCRLVSNLSWNFL

Specific function: Unknown

COG id: COG5595

COG function: function code R; Zn-ribbon-containing, possibly nucleic-acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016908 [H]

Pfam domain/function: PF10071 DUF2310 [H]

EC number: NA

Molecular weight: Translated: 29787; Mature: 29787

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLIETYFRLTALENNIESQSRLLNAVIDQWRYNGQIIGREIPLYLAEEDGTQGFAMRVI
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCEEEEEE
CPEQDSLFPQNNNAEVNRALQEAEKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTH
ECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECHHEECCCCCCCCCCCCCCCHHHHHHHHH
LQSCSPIHSGENLAPIPLYKQLKNQPHLSQDLIKWQENWQACDQLQMNGAVLEQQSLAEI
HCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SEHQSTLSKHGRYLAQEIAKETGIPTYYYLYRVGGQSLESEKSRCCPSCGANWALKNAIF
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHH
DTFHFKCDTCRLVSNLSWNFL
HHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MYLIETYFRLTALENNIESQSRLLNAVIDQWRYNGQIIGREIPLYLAEEDGTQGFAMRVI
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCEEEEEE
CPEQDSLFPQNNNAEVNRALQEAEKCGVIFDGFQLVGDDFNSDQTAENTSPAWQVLYTTH
ECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECHHEECCCCCCCCCCCCCCCHHHHHHHHH
LQSCSPIHSGENLAPIPLYKQLKNQPHLSQDLIKWQENWQACDQLQMNGAVLEQQSLAEI
HCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SEHQSTLSKHGRYLAQEIAKETGIPTYYYLYRVGGQSLESEKSRCCPSCGANWALKNAIF
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHH
DTFHFKCDTCRLVSNLSWNFL
HHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]