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The map label for this gene is 148827008

Identifier: 148827008

GI number: 148827008

Start: 250818

End: 251279

Strand: Direct

Name: 148827008

Synonym: CGSHiGG_01480

Alternate gene names: NA

Gene position: 250818-251279 (Clockwise)

Preceding gene: 148827003

Following gene: 148827009

Centisome position: 13.29

GC content: 37.23

Gene sequence:

>462_bases
TTGACGAGTTTATTACTTATTTTTACCGTACTTTCTGCTTGTTCTCGCGAAAAAAATACGTGTCGTGTGGTTAAAATTAG
TGATGGCGATACGCTCACTTGCCTCACTAAAGGCAATAAATCCATTAAAGTTCGTTTAGCCGAAATTGATGCGCCAGAAA
AATCTCAAGCCTTTGGGCAAAAATCGAAAAAAACCTTGTCTGATCTGGTTTATCAAAAAAACGTACGTCTTTCACTAAAA
GGAAAAGATCGCTATCAACGCACCTTAGCGGTGGTTTATTATCAAAAACAAAATATTAATTTAGAAATGGTTAAACAGGG
TATGGCATGGGCTTATAAGCAATATTCCCATGATCCGATTTATCTTCAAGCGCAAGAAAATGCACAAGCCAAAGGAATTG
GTCTTTGGGCAGACAATAATCCGATTGAACCAAGTCAATGGCGCAGACAAGAGAAAAATTAA

Upstream 100 bases:

>100_bases
AATTATTTTACGCTTTTTTTTGCTAACTTGAGCCATTTTTTCGGTAAAATAACCAGACTTAGATCAAAAACTTTGCAAAA
TGATAAATCGAAAAATACTA

Downstream 100 bases:

>100_bases
TATGGCTTTTGATTATCAAACGTTCCGTCAAGCATTTCCCTATTTCCAACGTGAAGATGCGGTTATTTATTTAGATAACG
CCGCCACCGCGTTGAAACCT

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTSLLLIFTVLSACSREKNTCRVVKISDGDTLTCLTKGNKSIKVRLAEIDAPEKSQAFGQKSKKTLSDLVYQKNVRLSLK
GKDRYQRTLAVVYYQKQNINLEMVKQGMAWAYKQYSHDPIYLQAQENAQAKGIGLWADNNPIEPSQWRRQEKN

Sequences:

>Translated_153_residues
MTSLLLIFTVLSACSREKNTCRVVKISDGDTLTCLTKGNKSIKVRLAEIDAPEKSQAFGQKSKKTLSDLVYQKNVRLSLK
GKDRYQRTLAVVYYQKQNINLEMVKQGMAWAYKQYSHDPIYLQAQENAQAKGIGLWADNNPIEPSQWRRQEKN
>Mature_152_residues
TSLLLIFTVLSACSREKNTCRVVKISDGDTLTCLTKGNKSIKVRLAEIDAPEKSQAFGQKSKKTLSDLVYQKNVRLSLKG
KDRYQRTLAVVYYQKQNINLEMVKQGMAWAYKQYSHDPIYLQAQENAQAKGIGLWADNNPIEPSQWRRQEKN

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 17515; Mature: 17384

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS01123 TNASE_1 ; PS01284 TNASE_2 ; PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLLLIFTVLSACSREKNTCRVVKISDGDTLTCLTKGNKSIKVRLAEIDAPEKSQAFGQ
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCHHHHHCH
KSKKTLSDLVYQKNVRLSLKGKDRYQRTLAVVYYQKQNINLEMVKQGMAWAYKQYSHDPI
HHHHHHHHHHHHCCCEEEEECCHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCE
YLQAQENAQAKGIGLWADNNPIEPSQWRRQEKN
EEEECCCCCCCEEEEECCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
TSLLLIFTVLSACSREKNTCRVVKISDGDTLTCLTKGNKSIKVRLAEIDAPEKSQAFGQ
CHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCHHHHHCH
KSKKTLSDLVYQKNVRLSLKGKDRYQRTLAVVYYQKQNINLEMVKQGMAWAYKQYSHDPI
HHHHHHHHHHHHCCCEEEEECCHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCE
YLQAQENAQAKGIGLWADNNPIEPSQWRRQEKN
EEEECCCCCCCEEEEECCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]