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The map label for this gene is nlpC [C]

Identifier: 148826991

GI number: 148826991

Start: 234282

End: 234767

Strand: Reverse

Name: nlpC [C]

Synonym: CGSHiGG_01385

Alternate gene names: 148826991

Gene position: 234767-234282 (Counterclockwise)

Preceding gene: 148826992

Following gene: 148826990

Centisome position: 12.44

GC content: 39.71

Gene sequence:

>486_bases
ATGAAAGTATATAAAACATTTTTAATCGCTACTGCCTCGCTGTTTTTATTCGCTTGTTCTAGTTTTCAAAACGATGATTA
TGCGATGAACTATAAAGGTCAAATCGGCGATCCTATTATGGCCATAGCCATGTTGAGCGAACAACAACATGAATGGGCTG
GTACACCTTATGTGCTCGGCGGCGTTTCTCGTCGTGGGGTAGATTGTTCTGGTTTTGTGCAGAAAACTTTCTTCGATCGT
TTTAATCTTCGTTTGCCTAGAAGCACTGTTGAACAAGCTAATTATGGTAAACATGTACGCAAAGAACATATTCAAACTGG
CGATTTAATTTTCTTTAAAACTGGCCGAGGTCCTAATGGTTATCATGTGGGGATTTATGTAAAAGAAGATAAATTCCTTC
ATGCTTCCACCAGAGGGGGAGTCGTCTATTCTTCAATGAATAACCCTTATTGGTCGAAAGCCTTCTGGCAAGTCAGACGG
ATTTAA

Upstream 100 bases:

>100_bases
TTTAAACCAGGGCAAAAGTTACGTGCCCGTGTAGAAAAAACTAAATAGTAAGCAACAAAAAGTGCGGTGAATTTCTACCG
CACTTTTCATATGAAAAGGT

Downstream 100 bases:

>100_bases
AAAGTATAATGCTGGAATTTTCCAGCATTTTTTATAATGATTTTTTTCAAATTTGGGAGATAAAAATGCCCTCAAACTTA
ACCGCACTTCAAATTCAACT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKVYKTFLIATASLFLFACSSFQNDDYAMNYKGQIGDPIMAIAMLSEQQHEWAGTPYVLGGVSRRGVDCSGFVQKTFFDR
FNLRLPRSTVEQANYGKHVRKEHIQTGDLIFFKTGRGPNGYHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRR
I

Sequences:

>Translated_161_residues
MKVYKTFLIATASLFLFACSSFQNDDYAMNYKGQIGDPIMAIAMLSEQQHEWAGTPYVLGGVSRRGVDCSGFVQKTFFDR
FNLRLPRSTVEQANYGKHVRKEHIQTGDLIFFKTGRGPNGYHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRR
I
>Mature_161_residues
MKVYKTFLIATASLFLFACSSFQNDDYAMNYKGQIGDPIMAIAMLSEQQHEWAGTPYVLGGVSRRGVDCSGFVQKTFFDR
FNLRLPRSTVEQANYGKHVRKEHIQTGDLIFFKTGRGPNGYHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRR
I

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788001, Length=128, Percent_Identity=55.46875, Blast_Score=153, Evalue=6e-39,
Organism=Escherichia coli, GI1788501, Length=115, Percent_Identity=50.4347826086956, Blast_Score=132, Evalue=9e-33,
Organism=Escherichia coli, GI1787944, Length=117, Percent_Identity=36.7521367521368, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 18410; Mature: 18410

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYKTFLIATASLFLFACSSFQNDDYAMNYKGQIGDPIMAIAMLSEQQHEWAGTPYVLG
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
GVSRRGVDCSGFVQKTFFDRFNLRLPRSTVEQANYGKHVRKEHIQTGDLIFFKTGRGPNG
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCC
YHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRRI
EEEEEEEECCCEEEECCCCCEEEECCCCCCHHHHHHHEECC
>Mature Secondary Structure
MKVYKTFLIATASLFLFACSSFQNDDYAMNYKGQIGDPIMAIAMLSEQQHEWAGTPYVLG
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
GVSRRGVDCSGFVQKTFFDRFNLRLPRSTVEQANYGKHVRKEHIQTGDLIFFKTGRGPNG
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCC
YHVGIYVKEDKFLHASTRGGVVYSSMNNPYWSKAFWQVRRI
EEEEEEEECCCEEEECCCCCEEEECCCCCCHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]