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The map label for this gene is yqcC [C]

Identifier: 148826938

GI number: 148826938

Start: 182215

End: 182535

Strand: Reverse

Name: yqcC [C]

Synonym: CGSHiGG_01060

Alternate gene names: 148826938

Gene position: 182535-182215 (Counterclockwise)

Preceding gene: 148826939

Following gene: 148826937

Centisome position: 9.67

GC content: 38.32

Gene sequence:

>321_bases
ATGCGTAATCAAACTAAACAGCATCTTGAACAGCTTCAAATTACCATGCAGCAACTTAATTTATGGCAAACGATGCCCCC
TGCTGCAGAGGCGTTTTTAAGTGAAGAACCTTTTTCAATTGATACGATGTCTGCCGAAGAGTGGCTACAGTGGGTATTTA
TTCCACGCATGCAGGCATTATTAGAAAGTGGTTCAGCCTTGCCACATAAAATTGCTATTTCTCCTTATATTGAAGAAGCA
ATGAAGGAATTTGATGAGTTACAACAACTATTAACTCCTTTAGTTGCTTTAGAAGAACTTCTGAACAATAACCAATGCTA
G

Upstream 100 bases:

>100_bases
GTGGTGTGATGAGTAAATTACAAGCCTTATATTTGAAAGAAAATGGTTTTTCAAATGTGCGTGTATTTGCAAAAAATATT
CATTAATTAGGATATAAAAT

Downstream 100 bases:

>100_bases
AAATTTTATATCAAGATGAGTTTCTCGTTGCGGTGAATAAGCCTGCTGGTATGCTGGTTCATCGCAGTTGGTTAGATCCT
CACGAAACTCAATTTGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPHKIAISPYIEEA
MKEFDELQQLLTPLVALEELLNNNQC

Sequences:

>Translated_106_residues
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPHKIAISPYIEEA
MKEFDELQQLLTPLVALEELLNNNQC
>Mature_106_residues
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPHKIAISPYIEEA
MKEFDELQQLLTPLVALEELLNNNQC

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqcC [H]

Homologues:

Organism=Escherichia coli, GI1789156, Length=79, Percent_Identity=44.3037974683544, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007384 [H]

Pfam domain/function: PF04287 DUF446 [H]

EC number: NA

Molecular weight: Translated: 12299; Mature: 12299

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LESGSALPHKIAISPYIEEAMKEFDELQQLLTPLVALEELLNNNQC
HHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LESGSALPHKIAISPYIEEAMKEFDELQQLLTPLVALEELLNNNQC
HHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]