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The map label for this gene is uspE [H]

Identifier: 148826926

GI number: 148826926

Start: 172377

End: 173399

Strand: Direct

Name: uspE [H]

Synonym: CGSHiGG_01000

Alternate gene names: 148826926

Gene position: 172377-173399 (Clockwise)

Preceding gene: 148826925

Following gene: 148826927

Centisome position: 9.13

GC content: 35.19

Gene sequence:

>1023_bases
GTGCTTGATAAAAATAAATTTATCCAAATTAATCTTGTACCTTGCCATTTTTGCTATTCTTTTTTATCCTATGCCTCAAT
TTTGGAGGCTATTATGAAATTTAAAAATATTCTCGTTGTACTTAATCCCAGTAATGAAAAACAGTACGCCCTAGCTCGTG
CAGTGCGTTTAGTTGAAGAACAAAAAAATGAAACTAAGGTAAAAATCACCGCACTTTTATCAGTCTATGATTTATCTTAT
GAAATGTCAGCTTTACTTTCTTCTGAAGAACGTTCAGAAATGCATCAACAAGTAATTGAAAAACACCGCCATGCGGTTCA
ATATTACTTAGATAAATATGCAAATCCAGAAATTGAATTACAATCTCATATTGTGTGGAATAGCAATGAAGCTGATGCAA
TTAACGAAGAAGTAGAAAATAATAATTACGATCTCGTCGTAAAATATACCAAAGACGAAGAAAAACTGACGTCTCTTATC
TTTACTCCCATTGATTGGCAACTTCTTCGTAAATGCCCTATTCCTGTCTTAATGGTTCGTGATGGCGATTGGAAACATCA
ACGCCGTATTCTTGTGGCGGTGAATGTTTCTGGAGAGCAAGAATATCAAGATGAATTTAATCAAGAGCTGGTAGAAACAG
GTATTTCACTCGCAGAAAATCTAAATCGTGGTAATGTCCATTTGGTGGCAGCCTACCCTTCCGCACCAATCAATATGGCG
ATTGATTTACCTGAATTTAATACTTCAGGTTATGAAAACGGTATTCGAGGTCAGCATCTTATTAATATGAAAGCTTTACG
CCAAAAATTTGGAATTGATGAAGATCATACTCACGTACGCGAAGGTTTTCCAGAGGAAGTTATTCCTGAAGTTGCGAAAG
AGATTGAAGCTGAATTAGTGATTTTAGGCACAGTGGGACGAACAGGTTTATCTGCCGCATTATTAGGCAATACTGCAGAA
CATGTGATTAGTAAATTAAGTTGTAATTTATTAGGCATTAAACCATCTAAAAAAGATGATTAA

Upstream 100 bases:

>100_bases
ACAATCAATGATTTAAATGGTTTAATTGAATTAACTGGTACGAATAAAACAAAAATTACATTAGTTAAATAAATTTAAGG
CGTGAATATCACGCCTTTTT

Downstream 100 bases:

>100_bases
AACATTTTCCTAAATTTATAAGACGCCCTAAATATTTTGTATTTGGGTATTTTTATACTATTTCTTATGGTATTTTTCAT
TTTGTGATCTCGATCACAAA

Product: universal stress protein UspE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLDKNKFIQINLVPCHFCYSFLSYASILEAIMKFKNILVVLNPSNEKQYALARAVRLVEEQKNETKVKITALLSVYDLSY
EMSALLSSEERSEMHQQVIEKHRHAVQYYLDKYANPEIELQSHIVWNSNEADAINEEVENNNYDLVVKYTKDEEKLTSLI
FTPIDWQLLRKCPIPVLMVRDGDWKHQRRILVAVNVSGEQEYQDEFNQELVETGISLAENLNRGNVHLVAAYPSAPINMA
IDLPEFNTSGYENGIRGQHLINMKALRQKFGIDEDHTHVREGFPEEVIPEVAKEIEAELVILGTVGRTGLSAALLGNTAE
HVISKLSCNLLGIKPSKKDD

Sequences:

>Translated_340_residues
MLDKNKFIQINLVPCHFCYSFLSYASILEAIMKFKNILVVLNPSNEKQYALARAVRLVEEQKNETKVKITALLSVYDLSY
EMSALLSSEERSEMHQQVIEKHRHAVQYYLDKYANPEIELQSHIVWNSNEADAINEEVENNNYDLVVKYTKDEEKLTSLI
FTPIDWQLLRKCPIPVLMVRDGDWKHQRRILVAVNVSGEQEYQDEFNQELVETGISLAENLNRGNVHLVAAYPSAPINMA
IDLPEFNTSGYENGIRGQHLINMKALRQKFGIDEDHTHVREGFPEEVIPEVAKEIEAELVILGTVGRTGLSAALLGNTAE
HVISKLSCNLLGIKPSKKDD
>Mature_340_residues
MLDKNKFIQINLVPCHFCYSFLSYASILEAIMKFKNILVVLNPSNEKQYALARAVRLVEEQKNETKVKITALLSVYDLSY
EMSALLSSEERSEMHQQVIEKHRHAVQYYLDKYANPEIELQSHIVWNSNEADAINEEVENNNYDLVVKYTKDEEKLTSLI
FTPIDWQLLRKCPIPVLMVRDGDWKHQRRILVAVNVSGEQEYQDEFNQELVETGISLAENLNRGNVHLVAAYPSAPINMA
IDLPEFNTSGYENGIRGQHLINMKALRQKFGIDEDHTHVREGFPEEVIPEVAKEIEAELVILGTVGRTGLSAALLGNTAE
HVISKLSCNLLGIKPSKKDD

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=304, Percent_Identity=49.671052631579, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 38723; Mature: 38723

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKNKFIQINLVPCHFCYSFLSYASILEAIMKFKNILVVLNPSNEKQYALARAVRLVEE
CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHH
QKNETKVKITALLSVYDLSYEMSALLSSEERSEMHQQVIEKHRHAVQYYLDKYANPEIEL
CCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
QSHIVWNSNEADAINEEVENNNYDLVVKYTKDEEKLTSLIFTPIDWQLLRKCPIPVLMVR
EEEEEECCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHCCCCEEEEE
DGDWKHQRRILVAVNVSGEQEYQDEFNQELVETGISLAENLNRGNVHLVAAYPSAPINMA
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEE
IDLPEFNTSGYENGIRGQHLINMKALRQKFGIDEDHTHVREGFPEEVIPEVAKEIEAELV
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCEE
ILGTVGRTGLSAALLGNTAEHVISKLSCNLLGIKPSKKDD
EEECCCCCCCHHHHHCCCHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MLDKNKFIQINLVPCHFCYSFLSYASILEAIMKFKNILVVLNPSNEKQYALARAVRLVEE
CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHH
QKNETKVKITALLSVYDLSYEMSALLSSEERSEMHQQVIEKHRHAVQYYLDKYANPEIEL
CCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
QSHIVWNSNEADAINEEVENNNYDLVVKYTKDEEKLTSLIFTPIDWQLLRKCPIPVLMVR
EEEEEECCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHCCCCEEEEE
DGDWKHQRRILVAVNVSGEQEYQDEFNQELVETGISLAENLNRGNVHLVAAYPSAPINMA
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEE
IDLPEFNTSGYENGIRGQHLINMKALRQKFGIDEDHTHVREGFPEEVIPEVAKEIEAELV
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCEE
ILGTVGRTGLSAALLGNTAEHVISKLSCNLLGIKPSKKDD
EEECCCCCCCHHHHHCCCHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]