Click here to switch to the map view.

The map label for this gene is 148826890

Identifier: 148826890

GI number: 148826890

Start: 153510

End: 153788

Strand: Direct

Name: 148826890

Synonym: CGSHiGG_00820

Alternate gene names: NA

Gene position: 153510-153788 (Clockwise)

Preceding gene: 148826882

Following gene: 148826910

Centisome position: 8.13

GC content: 38.35

Gene sequence:

>279_bases
ATGAACCATTTATTAACATTTTATGAAAAAATCATCTTTACCAATCCACTTGAGACAGGTATTCCAGAAGCGGTTGCCAA
ATTAGCTTTATTGAACGATTATTCTGCATTGCGTGCTTGGCGTGAACACTTAGGTTTAACCCAAGCTGAAGTGGCAAGCC
GTTTAGGAATTTCTCAAGCTGCTTATTCACAACACGAAAATTCACAGACCTTGCGGAAAAGCACTCGCATTAAAATAGCG
ACAGCACTTGGCATTAATTCCGCTCAATTAGATTTTTAA

Upstream 100 bases:

>100_bases
TCTTGTTTAGGTGTTAATCCACGACCAGACGTAGATTTTCCTTTCACGTCTGACATAGAAAATCCTTAAAATACTTGAAT
AAAACTTATAAAATAGAAAG

Downstream 100 bases:

>100_bases
TCTATTTACCGCCTTTTGCTTGATTAATCCACTTATTGAGATGATCTACTTGGCTTGCACACTTGTCTCGCTCTGCGGTT
ACCTTAACAAGCTGTATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Regulator Protein; Transcriptional Regulator; Helix-Turn-Helix Family; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIA
TALGINSAQLDF

Sequences:

>Translated_92_residues
MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIA
TALGINSAQLDF
>Mature_92_residues
MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQAAYSQHENSQTLRKSTRIKIA
TALGINSAQLDF

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10242; Mature: 10242

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQA
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCHHH
AYSQHENSQTLRKSTRIKIATALGINSAQLDF
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNHLLTFYEKIIFTNPLETGIPEAVAKLALLNDYSALRAWREHLGLTQAEVASRLGISQA
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCHHH
AYSQHENSQTLRKSTRIKIATALGINSAQLDF
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA