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The map label for this gene is uup-A [H]

Identifier: 148826817

GI number: 148826817

Start: 58603

End: 58920

Strand: Direct

Name: uup-A [H]

Synonym: CGSHiGG_00345

Alternate gene names: 148826817

Gene position: 58603-58920 (Clockwise)

Preceding gene: 148826814

Following gene: 148826821

Centisome position: 3.11

GC content: 40.88

Gene sequence:

>318_bases
ATGCAAAATCGAACCACAAAATTATCCGCACTTTCGGGCGGTTGGGTGCGTAAAGCGGCACTAGCACGTGCATTGGTGTG
CGATCCTGATGTGTTATTACTTGATGAACCAACCAACCATTTGGATGTGGAAGCTATTGAATGGTTGGAAAATTTCTTAC
TGGATTTCCAAGGTAGTATTGTATTTATTTCCCATGACCGTTCTTTTATTCGCAAAATGGCAACACGCATTGTGGATTTA
GATCGCGGTCAATTGCGGTCTTATCTAGGCAATTACGATTTATATTTAACCACGAAAGAAGAAAAATCTACGCGTTGA

Upstream 100 bases:

>100_bases
GAAGTACAAATAAAGCAAGATCATTACTTATTTGTTTGTGTTCTATATCTTGACCGTGAGAAGCATAACTACCACATTCG
TTTCTAATTTCTGCAATATA

Downstream 100 bases:

>100_bases
AGCCTTGCAGAATGAATTATTTGATAAACATCTAGCACAGGAAGAAGTGTGGATTCGCCAAGGTATCAAGGCTCGCCGTA
CAAGAAATGAAGGGCGAGTG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQNRTTKLSALSGGWVRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSIVFISHDRSFIRKMATRIVDL
DRGQLRSYLGNYDLYLTTKEEKSTR

Sequences:

>Translated_105_residues
MQNRTTKLSALSGGWVRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSIVFISHDRSFIRKMATRIVDL
DRGQLRSYLGNYDLYLTTKEEKSTR
>Mature_105_residues
MQNRTTKLSALSGGWVRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSIVFISHDRSFIRKMATRIVDL
DRGQLRSYLGNYDLYLTTKEEKSTR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=102, Percent_Identity=47.0588235294118, Blast_Score=99, Evalue=5e-22,
Organism=Homo sapiens, GI27881506, Length=95, Percent_Identity=47.3684210526316, Blast_Score=94, Evalue=3e-20,
Organism=Homo sapiens, GI10947137, Length=95, Percent_Identity=47.3684210526316, Blast_Score=94, Evalue=3e-20,
Organism=Homo sapiens, GI10947135, Length=92, Percent_Identity=46.7391304347826, Blast_Score=93, Evalue=4e-20,
Organism=Homo sapiens, GI69354671, Length=92, Percent_Identity=46.7391304347826, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787182, Length=94, Percent_Identity=75.531914893617, Blast_Score=152, Evalue=4e-39,
Organism=Escherichia coli, GI2367384, Length=97, Percent_Identity=50.5154639175258, Blast_Score=104, Evalue=1e-24,
Organism=Escherichia coli, GI1787041, Length=98, Percent_Identity=46.9387755102041, Blast_Score=102, Evalue=6e-24,
Organism=Escherichia coli, GI1789751, Length=88, Percent_Identity=45.4545454545455, Blast_Score=95, Evalue=8e-22,
Organism=Escherichia coli, GI1787758, Length=100, Percent_Identity=39, Blast_Score=63, Evalue=3e-12,
Organism=Escherichia coli, GI1787712, Length=97, Percent_Identity=36.0824742268041, Blast_Score=60, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=104, Percent_Identity=50, Blast_Score=100, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17555318, Length=95, Percent_Identity=47.3684210526316, Blast_Score=92, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17559834, Length=85, Percent_Identity=45.8823529411765, Blast_Score=92, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6320874, Length=98, Percent_Identity=43.8775510204082, Blast_Score=92, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321121, Length=95, Percent_Identity=44.2105263157895, Blast_Score=90, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6324314, Length=89, Percent_Identity=46.0674157303371, Blast_Score=85, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6325030, Length=101, Percent_Identity=40.5940594059406, Blast_Score=83, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6323278, Length=89, Percent_Identity=44.9438202247191, Blast_Score=82, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666836, Length=102, Percent_Identity=50.9803921568627, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24641342, Length=95, Percent_Identity=44.2105263157895, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24642252, Length=101, Percent_Identity=44.5544554455446, Blast_Score=89, Evalue=4e-19,
Organism=Drosophila melanogaster, GI18859989, Length=101, Percent_Identity=44.5544554455446, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 12072; Mature: 12072

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRTTKLSALSGGWVRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSI
CCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCE
VFISHDRSFIRKMATRIVDLDRGQLRSYLGNYDLYLTTKEEKSTR
EEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure
MQNRTTKLSALSGGWVRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSI
CCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCE
VFISHDRSFIRKMATRIVDLDRGQLRSYLGNYDLYLTTKEEKSTR
EEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]