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The map label for this gene is ycdY [C]

Identifier: 148826801

GI number: 148826801

Start: 38099

End: 38653

Strand: Direct

Name: ycdY [C]

Synonym: CGSHiGG_00240

Alternate gene names: 148826801

Gene position: 38099-38653 (Clockwise)

Preceding gene: 148826800

Following gene: 148826808

Centisome position: 2.02

GC content: 36.94

Gene sequence:

>555_bases
ATGTCTGAAAAACAAATTAATAATTTTTCATTAATTAGTCGATTATTCGGTAATCTTTTTTATCGTTCTCCAACAGATAA
AGTACTCGCTGACGCATTTGTTTGGTTACAACAAAAAGGTTTGAGTCAAGTTTGGGCGTTAGATACTGATAAAGAAAGTG
AATTAGCGCTGAATAGCTTGCAAGTTAAAATCGATCTCAATTTGTTGAACGAAGAGTATCAAAAATTATTTGGTGCGAAT
GGGAAAGTGATGACGGCTATTTCAGCTTATGGCATTGATGTTGAAGAATTTGTGAATTTTCGCCTTGTACGCAATATGCC
AGAGGTGGAAAGTGCGGATCATTTTGCTTTATTATTGCTTACCGCCTCTTGGCTTGAAGACAATTCGGATTCTTTAGTGG
CTCAACAAGAATTCTTTGAAACTTTTTTACTGCCTTGTGCAGCGAAGTTTTTAACCCAAGTAGAAAATCAAGCAACTTTG
CCTTTTTATCGTGCATTGGCCCTTCTTACACGAGAAATATTGGCGGCAATGGCGGATGAATTGGAAGAAGAGTAG

Upstream 100 bases:

>100_bases
GATATTCATTTAATTGATGATAAGGCGCGTAAAGCGATGATTGAACTTGCTGCTCAAAAAACTCAAGCAAAATTGACCGC
ACTTTTAAAGGAAAAGCGTA

Downstream 100 bases:

>100_bases
GCAATGTTTTGCTTTCTTCTAAGTATTGAGGAAAGCAAGCAATATTTTATAGATAGATTACAAAATCTTTTGTATCGATA
ACTCGGCATTCACGTTCGGC

Product: putative component of anaerobic dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSEKQINNFSLISRLFGNLFYRSPTDKVLADAFVWLQQKGLSQVWALDTDKESELALNSLQVKIDLNLLNEEYQKLFGAN
GKVMTAISAYGIDVEEFVNFRLVRNMPEVESADHFALLLLTASWLEDNSDSLVAQQEFFETFLLPCAAKFLTQVENQATL
PFYRALALLTREILAAMADELEEE

Sequences:

>Translated_184_residues
MSEKQINNFSLISRLFGNLFYRSPTDKVLADAFVWLQQKGLSQVWALDTDKESELALNSLQVKIDLNLLNEEYQKLFGAN
GKVMTAISAYGIDVEEFVNFRLVRNMPEVESADHFALLLLTASWLEDNSDSLVAQQEFFETFLLPCAAKFLTQVENQATL
PFYRALALLTREILAAMADELEEE
>Mature_183_residues
SEKQINNFSLISRLFGNLFYRSPTDKVLADAFVWLQQKGLSQVWALDTDKESELALNSLQVKIDLNLLNEEYQKLFGANG
KVMTAISAYGIDVEEFVNFRLVRNMPEVESADHFALLLLTASWLEDNSDSLVAQQEFFETFLLPCAAKFLTQVENQATLP
FYRALALLTREILAAMADELEEE

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family [H]

Homologues:

Organism=Escherichia coli, GI1787272, Length=185, Percent_Identity=38.9189189189189, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009073 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20924; Mature: 20793

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKQINNFSLISRLFGNLFYRSPTDKVLADAFVWLQQKGLSQVWALDTDKESELALNSL
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHE
QVKIDLNLLNEEYQKLFGANGKVMTAISAYGIDVEEFVNFRLVRNMPEVESADHFALLLL
EEEEEHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
TASWLEDNSDSLVAQQEFFETFLLPCAAKFLTQVENQATLPFYRALALLTREILAAMADE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LEEE
HCCC
>Mature Secondary Structure 
SEKQINNFSLISRLFGNLFYRSPTDKVLADAFVWLQQKGLSQVWALDTDKESELALNSL
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHE
QVKIDLNLLNEEYQKLFGANGKVMTAISAYGIDVEEFVNFRLVRNMPEVESADHFALLLL
EEEEEHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
TASWLEDNSDSLVAQQEFFETFLLPCAAKFLTQVENQATLPFYRALALLTREILAAMADE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LEEE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]