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The map label for this gene is ycaK [C]

Identifier: 148826800

GI number: 148826800

Start: 37492

End: 38106

Strand: Direct

Name: ycaK [C]

Synonym: CGSHiGG_00235

Alternate gene names: 148826800

Gene position: 37492-38106 (Clockwise)

Preceding gene: 148826799

Following gene: 148826801

Centisome position: 1.99

GC content: 33.82

Gene sequence:

>615_bases
ATGAATCACTTAATTATTTTTGCTCATCCTAATTCAGTGCGTAGTTTTGGGCGAGCGATTGCCAATCGTATTGAGCAAAT
TAGTCAAGAAAATGGTGTAAATGTATTTTTTCGTGATCTTTATGAAATGAATTTCAATCCAATTTTATCTCATGAAGAAT
TGCAGAATGCTAACAAAGGTATTATTCCAGAAGATATTCAGCAAGAGCATGATTTTATTCTTCAAGCAGATTTAATTACG
TTGGTTTATCCCCTTTGGTGGATGGGGTTCCCAGCAATTTTGAAAGGCTATTTAGATCGCGTATTAAGTCACGGTTTTGC
CTATAAAACAGAAAACGGCGAATCAGTGGGGTTGCTAAAAAATAAGCAAATGCAGCAATTTATTACGATTGGCAGTAATG
TTGATCAATATAAAGAATTTGGTGTGGATAAATCGCTTAATCATTGTTTGATTAATGGATTATTCAATTATTGTGGCATT
GAAAATGTCGAGTTTGAATTATTTGGAGATATTCATTTAATTGATGATAAGGCGCGTAAAGCGATGATTGAACTTGCTGC
TCAAAAAACTCAAGCAAAATTGACCGCACTTTTAAAGGAAAAGCGTAATGTCTGA

Upstream 100 bases:

>100_bases
CGGGCTATGCCCGCTTTTTTTATGTGATTTTATATGCAAAGTGCGCTCTATTTTGATAGACTTCTGTCACGTTTTATTTC
CCTACAAATAGGTAAGAAAA

Downstream 100 bases:

>100_bases
AAAACAAATTAATAATTTTTCATTAATTAGTCGATTATTCGGTAATCTTTTTTATCGTTCTCCAACAGATAAAGTACTCG
CTGACGCATTTGTTTGGTTA

Product: putative NAD(P)H oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANKGIIPEDIQQEHDFILQADLIT
LVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLKNKQMQQFITIGSNVDQYKEFGVDKSLNHCLINGLFNYCGI
ENVEFELFGDIHLIDDKARKAMIELAAQKTQAKLTALLKEKRNV

Sequences:

>Translated_204_residues
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANKGIIPEDIQQEHDFILQADLIT
LVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLKNKQMQQFITIGSNVDQYKEFGVDKSLNHCLINGLFNYCGI
ENVEFELFGDIHLIDDKARKAMIELAAQKTQAKLTALLKEKRNV
>Mature_204_residues
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANKGIIPEDIQQEHDFILQADLIT
LVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLKNKQMQQFITIGSNVDQYKEFGVDKSLNHCLINGLFNYCGI
ENVEFELFGDIHLIDDKARKAMIELAAQKTQAKLTALLKEKRNV

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=210, Percent_Identity=27.6190476190476, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI4505415, Length=201, Percent_Identity=29.8507462686567, Blast_Score=79, Evalue=3e-15,
Organism=Escherichia coli, GI1787129, Length=194, Percent_Identity=31.9587628865979, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 23414; Mature: 23414

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANKG
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCC
IIPEDIQQEHDFILQADLITLVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCEECHHH
NKQMQQFITIGSNVDQYKEFGVDKSLNHCLINGLFNYCGIENVEFELFGDIHLIDDKARK
HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECHHHHH
AMIELAAQKTQAKLTALLKEKRNV
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANKG
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCC
IIPEDIQQEHDFILQADLITLVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCEECHHH
NKQMQQFITIGSNVDQYKEFGVDKSLNHCLINGLFNYCGIENVEFELFGDIHLIDDKARK
HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECHHHHH
AMIELAAQKTQAKLTALLKEKRNV
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]