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The map label for this gene is 148826766

Identifier: 148826766

GI number: 148826766

Start: 9247

End: 9567

Strand: Direct

Name: 148826766

Synonym: CGSHiGG_00065

Alternate gene names: NA

Gene position: 9247-9567 (Clockwise)

Preceding gene: 148826759

Following gene: 148826768

Centisome position: 0.49

GC content: 41.12

Gene sequence:

>321_bases
ATGGCGACAATTATCAAGAATGGCAAGCGTTGGCGTGCACAAGTTTGGCGTGAGCAAATCAGCCACTTTTTTGACTCAAG
CAGACGCAAAAAATGGGCAGAAATGCTCGAAAAACAGCTCGAATCAGGAAAGTATAATGAAATCCCTGATATTACATTGG
ATGAACTGATTGATAAGTATCTAAAAGAAGTCACTGTAACCAAGTGCGGGAAACGTGAAGAGCGCATAAGACTATTGCGT
CTTTCTCAAACTCCGCTTGCCGCAATATCTTTACAAGAAATAGGAAAGCACACTTTCGCGAGTGGTAAAATCAACGATTA
A

Upstream 100 bases:

>100_bases
TTTTATATCAAAATCGCCTAAAAGGTAGTATTTTCATACCGATTGGGATCGATTTCGATCTGTTCTATACTCCATTGCAC
ACATTTTTATGGAGTAAACC

Downstream 100 bases:

>100_bases
AAGAAGTCTCTCCAGCAACAGTTTTGCGCGAACGTAGTTCGCTTTCTGCTCTAATGGCCAAAACGATTGAATGGGATTTT
ATAACAGAACCCCCTAAAAT

Product: putative integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MATIIKNGKRWRAQVWREQISHFFDSSRRKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKCGKREERIRLLR
LSQTPLAAISLQEIGKHTFASGKIND

Sequences:

>Translated_106_residues
MATIIKNGKRWRAQVWREQISHFFDSSRRKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKCGKREERIRLLR
LSQTPLAAISLQEIGKHTFASGKIND
>Mature_105_residues
ATIIKNGKRWRAQVWREQISHFFDSSRRKKWAEMLEKQLESGKYNEIPDITLDELIDKYLKEVTVTKCGKREERIRLLRL
SQTPLAAISLQEIGKHTFASGKIND

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 12461; Mature: 12329

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIIKNGKRWRAQVWREQISHFFDSSRRKKWAEMLEKQLESGKYNEIPDITLDELIDKY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LKEVTVTKCGKREERIRLLRLSQTPLAAISLQEIGKHTFASGKIND
HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATIIKNGKRWRAQVWREQISHFFDSSRRKKWAEMLEKQLESGKYNEIPDITLDELIDKY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LKEVTVTKCGKREERIRLLRLSQTPLAAISLQEIGKHTFASGKIND
HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]