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The map label for this gene is pcp [H]

Identifier: 148826759

GI number: 148826759

Start: 647

End: 1111

Strand: Direct

Name: pcp [H]

Synonym: CGSHiGG_00015

Alternate gene names: 148826759

Gene position: 647-1111 (Clockwise)

Preceding gene: 148826758

Following gene: 148826766

Centisome position: 0.03

GC content: 41.72

Gene sequence:

>465_bases
ATGAAAAAAACAAATATGGCATTAGCACTGTTAGTTGCTTTTAGTGTAACTGGTTGTGCAAATACTGATATTTTCAGCGG
TGATGTTTATAGCGCATCTCAAGCAAAGGAAGCGCGTTCAATTACTTATGGTACGATTGTTTCTGTACGCCCTGTTAAAA
TCCAAGCTGATAATCAAGGTGTAGTTGGTACGCTTGGTGGTGGAGCTTTAGGTGGTATTGCTGGTAGTACAATTGGCGGT
GGTCGTGGTCAAGCTATTGCAGCAGTAGTTGGTGCAATTGGCGGTGCAATAGCTGGAAGTAAAATCGAAGAAAAAATGAG
TCAAGTAAACGGTGCTGAACTTGTAATTAAGAAAGATGATGGTCAAGAGATCGTTGTTGTTCAAAAGGCTGACAGCAGTT
TTGTAGCTGGTCGCCGAGTTCGTATTGTTGGTGGCGGCTCAAGCTTAAATGTTTCTGTGCTATAA

Upstream 100 bases:

>100_bases
GGTGCTTGTGTTTTAGTATCTGACAATGGTAATACTAAAGACATTTCAACTTTTTCTCCAAGAAACCCACTTTAATTCCT
TCTAATATAGAGAATATTAT

Downstream 100 bases:

>100_bases
CCAATAGCATTAAAGTCTAATATGATTAATCAGTGTCTTAACTTAGTAAGGCACTGATTTTTTATAATTAAATTCATTTA
AAATATATATTTATCGTCTA

Product: 15 kDa peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 15 kDa lipoprotein; PAL cross-reacting lipoprotein [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQGVVGTLGGGALGGIAGSTIGG
GRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDDGQEIVVVQKADSSFVAGRRVRIVGGGSSLNVSVL

Sequences:

>Translated_154_residues
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQGVVGTLGGGALGGIAGSTIGG
GRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDDGQEIVVVQKADSSFVAGRRVRIVGGGSSLNVSVL
>Mature_154_residues
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQGVVGTLGGGALGGIAGSTIGG
GRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDDGQEIVVVQKADSSFVAGRRVRIVGGGSSLNVSVL

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=144, Percent_Identity=47.2222222222222, Blast_Score=119, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15337; Mature: 15337

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQG
CCCCHHHHHEEEHHHHCCCCCCCEECCCCCCCCHHHHHHCEEEEEEEEEEEEEEEECCCC
VVGTLGGGALGGIAGSTIGGGRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDD
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCC
GQEIVVVQKADSSFVAGRRVRIVGGGSSLNVSVL
CCEEEEEEECCCCCCCCCEEEEEECCCEEEEEEC
>Mature Secondary Structure
MKKTNMALALLVAFSVTGCANTDIFSGDVYSASQAKEARSITYGTIVSVRPVKIQADNQG
CCCCHHHHHEEEHHHHCCCCCCCEECCCCCCCCHHHHHHCEEEEEEEEEEEEEEEECCCC
VVGTLGGGALGGIAGSTIGGGRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVIKKDD
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCC
GQEIVVVQKADSSFVAGRRVRIVGGGSSLNVSVL
CCEEEEEEECCCCCCCCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 7542800 [H]