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The map label for this gene is dxr [H]

Identifier: 148826548

GI number: 148826548

Start: 1592396

End: 1593589

Strand: Direct

Name: dxr [H]

Synonym: CGSHiEE_08025

Alternate gene names: 148826548

Gene position: 1592396-1593589 (Clockwise)

Preceding gene: 148826547

Following gene: 148826550

Centisome position: 87.83

GC content: 38.78

Gene sequence:

>1194_bases
ATGCAAAAACAAAACATTGTCATTCTTGGTTCAACGGGATCAATCGGTAAGAGTACCCTTTCTGTTATTGAAAATAATCC
TGAAAAATATCATGCATTTGCACTCGTCGGCGGAAAAAATGTAGAAACAATGTTTGAACAATGCATAAAATTCCGACCGC
ACTTTGCGGCTCTTGATGATGTAAATGCTGCTAAAATTTTACGTGAGAAATTAATTGCGCATCATATTCCAACGGAAGTA
TTAGCAGGACAACGAGCTATTTGCGAACTCGCCGCACACCCAGATGCCGATCAGATAATGGCGTCGATTGTTGGTGCCGC
AGGATTGTTACCGACTCTTTCAGCGGTTAAAGCGGGTAAACGGGTATTACTGGCGAATAAAGAATCATTGGTAACCTGCG
GACAGCTTTTTATTGATGCTGTAAAAAACTATAGCGCGAAGCTTTTACCAGTAGATAGTGAACATAATGCTATCTTTCAA
TCATTACCGCCAGAAGCACAAGAAAAAATTGGTTTTTGCCCACTTTCTGAATTAGGTGTAAGTAAAATTATACTCACTGG
TTCTGGCGGGCCATTCCGTTATACGCCACTTGAACAATTCACCAACATAACACCAGAACAAGCGGTTGCGCACCCTAATT
GGTCTATGGGTAAAAAAATTTCTGTCGATTCAGCAACAATGATGAATAAAGGCTTAGAATACATTGAGGCTCGCTGGCTT
TTCAATGCAAGTGCGGAGGAAATGGAAGTCATTATTCATCCACAATCGATTATTCATTCTATGGTGCGTTATGTTGATGG
CTCAGTCATAGCTCAAATGGGAAATCCAGATATGCGTACACCAATTGCAGAAACTATGGCATATCCTCACCGCACTTTTG
CTGGAGTAGAACCACTCGATTTCTTTAAAATCAAAGAACTGACTTTTATTGAACCTGATTTTAATCGCTATCCAAATTTA
AAGCTGGCTATTGATGCCTTTGCTGCGGGTCAATATGCGACAACAGCCATGAATACAGCTAATGAAATTGCTGTACAAGC
ATTTTTAGATCGTCAAATTAGTTTTATGGATATTGCAAAAATTAATTTGAAAACAATTGAGAAAATTTCGCCTTATACCA
TTCAAAATATTGATGATGTACTCGAAATTGATGCACAAGCAAGAGAGATTGCGAAAACACTAATTAGAGAATAG

Upstream 100 bases:

>100_bases
AATACGAAAGGCAGACAGTTTTGTCTGCCTTTATTTTATTAGGTATGCGAATTTAGACGTATCAATGAAAATATAATCAA
CAAAGTGCGGTAAAGATTCT

Downstream 100 bases:

>100_bases
ACCTAGAATAACTAGGTCTAGTTTATTCGATTTAATGAAATACAAATTCCAAAATGCACATATAGGCTGCAATACAAAAT
AAAATAATCGCCAATAATTT

Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Products: NA

Alternate protein names: DXP reductoisomerase; 1-deoxyxylulose-5-phosphate reductoisomerase; 2-C-methyl-D-erythritol 4-phosphate synthase [H]

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MQKQNIVILGSTGSIGKSTLSVIENNPEKYHAFALVGGKNVETMFEQCIKFRPHFAALDDVNAAKILREKLIAHHIPTEV
LAGQRAICELAAHPDADQIMASIVGAAGLLPTLSAVKAGKRVLLANKESLVTCGQLFIDAVKNYSAKLLPVDSEHNAIFQ
SLPPEAQEKIGFCPLSELGVSKIILTGSGGPFRYTPLEQFTNITPEQAVAHPNWSMGKKISVDSATMMNKGLEYIEARWL
FNASAEEMEVIIHPQSIIHSMVRYVDGSVIAQMGNPDMRTPIAETMAYPHRTFAGVEPLDFFKIKELTFIEPDFNRYPNL
KLAIDAFAAGQYATTAMNTANEIAVQAFLDRQISFMDIAKINLKTIEKISPYTIQNIDDVLEIDAQAREIAKTLIRE

Sequences:

>Translated_397_residues
MQKQNIVILGSTGSIGKSTLSVIENNPEKYHAFALVGGKNVETMFEQCIKFRPHFAALDDVNAAKILREKLIAHHIPTEV
LAGQRAICELAAHPDADQIMASIVGAAGLLPTLSAVKAGKRVLLANKESLVTCGQLFIDAVKNYSAKLLPVDSEHNAIFQ
SLPPEAQEKIGFCPLSELGVSKIILTGSGGPFRYTPLEQFTNITPEQAVAHPNWSMGKKISVDSATMMNKGLEYIEARWL
FNASAEEMEVIIHPQSIIHSMVRYVDGSVIAQMGNPDMRTPIAETMAYPHRTFAGVEPLDFFKIKELTFIEPDFNRYPNL
KLAIDAFAAGQYATTAMNTANEIAVQAFLDRQISFMDIAKINLKTIEKISPYTIQNIDDVLEIDAQAREIAKTLIRE
>Mature_397_residues
MQKQNIVILGSTGSIGKSTLSVIENNPEKYHAFALVGGKNVETMFEQCIKFRPHFAALDDVNAAKILREKLIAHHIPTEV
LAGQRAICELAAHPDADQIMASIVGAAGLLPTLSAVKAGKRVLLANKESLVTCGQLFIDAVKNYSAKLLPVDSEHNAIFQ
SLPPEAQEKIGFCPLSELGVSKIILTGSGGPFRYTPLEQFTNITPEQAVAHPNWSMGKKISVDSATMMNKGLEYIEARWL
FNASAEEMEVIIHPQSIIHSMVRYVDGSVIAQMGNPDMRTPIAETMAYPHRTFAGVEPLDFFKIKELTFIEPDFNRYPNL
KLAIDAFAAGQYATTAMNTANEIAVQAFLDRQISFMDIAKINLKTIEKISPYTIQNIDDVLEIDAQAREIAKTLIRE

Specific function: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) [H]

COG id: COG0743

COG function: function code I; 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DXR family [H]

Homologues:

Organism=Escherichia coli, GI1786369, Length=389, Percent_Identity=64.0102827763496, Blast_Score=514, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003821
- InterPro:   IPR013644
- InterPro:   IPR013512
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08436 DXP_redisom_C; PF02670 DXP_reductoisom [H]

EC number: =1.1.1.267 [H]

Molecular weight: Translated: 43713; Mature: 43713

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQNIVILGSTGSIGKSTLSVIENNPEKYHAFALVGGKNVETMFEQCIKFRPHFAALDD
CCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
VNAAKILREKLIAHHIPTEVLAGQRAICELAAHPDADQIMASIVGAAGLLPTLSAVKAGK
CCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RVLLANKESLVTCGQLFIDAVKNYSAKLLPVDSEHNAIFQSLPPEAQEKIGFCPLSELGV
EEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCHHHHHCCCCCHHHCCC
SKIILTGSGGPFRYTPLEQFTNITPEQAVAHPNWSMGKKISVDSATMMNKGLEYIEARWL
EEEEEECCCCCEEECCHHHHHCCCHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHE
FNASAEEMEVIIHPQSIIHSMVRYVDGSVIAQMGNPDMRTPIAETMAYPHRTFAGVEPLD
ECCCCCCEEEEECCHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHCCCCHHHCCCCCCH
FFKIKELTFIEPDFNRYPNLKLAIDAFAAGQYATTAMNTANEIAVQAFLDRQISFMDIAK
HEEECCEEEECCCCCCCCCCEEEEEEHHCCCHHHHHHCCHHHHHHHHHHHCCCCCHHHHH
INLKTIEKISPYTIQNIDDVLEIDAQAREIAKTLIRE
CCHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKQNIVILGSTGSIGKSTLSVIENNPEKYHAFALVGGKNVETMFEQCIKFRPHFAALDD
CCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
VNAAKILREKLIAHHIPTEVLAGQRAICELAAHPDADQIMASIVGAAGLLPTLSAVKAGK
CCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
RVLLANKESLVTCGQLFIDAVKNYSAKLLPVDSEHNAIFQSLPPEAQEKIGFCPLSELGV
EEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCHHHHHCCCCCHHHCCC
SKIILTGSGGPFRYTPLEQFTNITPEQAVAHPNWSMGKKISVDSATMMNKGLEYIEARWL
EEEEEECCCCCEEECCHHHHHCCCHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHE
FNASAEEMEVIIHPQSIIHSMVRYVDGSVIAQMGNPDMRTPIAETMAYPHRTFAGVEPLD
ECCCCCCEEEEECCHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHCCCCHHHCCCCCCH
FFKIKELTFIEPDFNRYPNLKLAIDAFAAGQYATTAMNTANEIAVQAFLDRQISFMDIAK
HEEECCEEEECCCCCCCCCCEEEEEEHHCCCHHHHHHCCHHHHHHHHHHHCCCCCHHHHH
INLKTIEKISPYTIQNIDDVLEIDAQAREIAKTLIRE
CCHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA