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The map label for this gene is rfaL [C]

Identifier: 148826481

GI number: 148826481

Start: 1520557

End: 1521783

Strand: Direct

Name: rfaL [C]

Synonym: CGSHiEE_07660

Alternate gene names: 148826481

Gene position: 1520557-1521783 (Clockwise)

Preceding gene: 148826478

Following gene: 148826490

Centisome position: 83.87

GC content: 29.42

Gene sequence:

>1227_bases
ATGATTCAAGAAAAACATCTAACGTTTACAATTAACCTCTTAGTTTCTCTATTTTTCTTAACCGTTTTAGTCGTTCCAAA
GGGTTATAACTATGCGCCAATAATATTAAGCGCAATTGGATTGATTTATTTCATACCATTAAAGAAAAAACTATCTTTTA
GCTCTGAAGATAAAAAAGTGATTTTTTCTTTTTTGTTTTATTTCTCCACATTCTTATTATCTATCATTATCAATAAAGAT
GGGATTAGAGAAATAGATAATCCAAGCCGACTTCTTTTATTCATTCCTCTACTACTTTTATTCAAAAACTTTCCAATAAA
AAGGAAAACAATTTTATACGCAATTCCTTCTAGTGCATTAATTACTGGATGCGTTGCGTTATTTCAGAAGTTTGTATTAG
GATATGAAAAACCATTTCCTGAAACAATGCATATACAAATGGGTGATATCGCCATATCTTTAGCAATATCAAGTCTTATT
ATTAGTATCTATTTTTCTATAAAAAAAGAATATAAATCAGCACTATTTGGAATGATTGGTCTGATACTAGCTGTAAGTAC
TAGTGCGCTATCTGGGGCTAGAGGTGGATGGATTGGCTTACCCGTTGTAATTGGTATAATTTTATTTCTATACAAAGAAG
ACATTAATAAGAAACTTATTATAACTTTAGTTACAGTTATTACCATTGGATTAACCGCACTCATTGCCAATCCTAAATTC
GGAATTGAAAAACGATATAACGCAGCAAAATCAGATATTGTTAGCTATTTAGAAAAAAACAATAGAAATACCTCATTAGG
TGCCAGATTTGACATGTGGGAAAATGCCTTAATTGCTATAAAGGAAGCGCCTATCTTTGGCCATGGGAGTAATGGATACG
AGGAGTTTAGACATAGACAAGTAAAATCTAAACAAATGGCTAAAACCACTTTAAATTTTGGAAGTTTACATAATCAATAT
TTAGAATCTTGGGTGAAACGTGGTTTAGTTGGATTTATAGCATTAATCCTGATTATTCTAACTCCAATATTTTTCTTTAT
TAAAAATTTAAACACCCATAATTTAGAAACAAAATGTATTTGTATTTTAGGAATTATACATATTGTTTCCCATATATTTT
ATTTCACAAGCCAGTCATTCTTGGCTCATAACTCAGGCAATATTTTTTACTTCTTCAACTATCTTATATTTTATTGTCTA
ATAAAAAGAGAAAAAATCACAAGATAG

Upstream 100 bases:

>100_bases
TTATACCTAATTTCACATCATTCAATCATAAATAACAAGCATTTTACAAATATTTAAGGTAGAATCTACTCAATTTAAGT
TTGCACATGCTTTTATTCGT

Downstream 100 bases:

>100_bases
ATAAACATTCTTATCTTTTACCCTATTTAAGAAGATTAACTGTTAAACAAATACCATTGTACTGTCTGGCTAAGTCCTCG
TTCAAAGGTTATTTTCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MIQEKHLTFTINLLVSLFFLTVLVVPKGYNYAPIILSAIGLIYFIPLKKKLSFSSEDKKVIFSFLFYFSTFLLSIIINKD
GIREIDNPSRLLLFIPLLLLFKNFPIKRKTILYAIPSSALITGCVALFQKFVLGYEKPFPETMHIQMGDIAISLAISSLI
ISIYFSIKKEYKSALFGMIGLILAVSTSALSGARGGWIGLPVVIGIILFLYKEDINKKLIITLVTVITIGLTALIANPKF
GIEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIKEAPIFGHGSNGYEEFRHRQVKSKQMAKTTLNFGSLHNQY
LESWVKRGLVGFIALILIILTPIFFFIKNLNTHNLETKCICILGIIHIVSHIFYFTSQSFLAHNSGNIFYFFNYLIFYCL
IKREKITR

Sequences:

>Translated_408_residues
MIQEKHLTFTINLLVSLFFLTVLVVPKGYNYAPIILSAIGLIYFIPLKKKLSFSSEDKKVIFSFLFYFSTFLLSIIINKD
GIREIDNPSRLLLFIPLLLLFKNFPIKRKTILYAIPSSALITGCVALFQKFVLGYEKPFPETMHIQMGDIAISLAISSLI
ISIYFSIKKEYKSALFGMIGLILAVSTSALSGARGGWIGLPVVIGIILFLYKEDINKKLIITLVTVITIGLTALIANPKF
GIEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIKEAPIFGHGSNGYEEFRHRQVKSKQMAKTTLNFGSLHNQY
LESWVKRGLVGFIALILIILTPIFFFIKNLNTHNLETKCICILGIIHIVSHIFYFTSQSFLAHNSGNIFYFFNYLIFYCL
IKREKITR
>Mature_408_residues
MIQEKHLTFTINLLVSLFFLTVLVVPKGYNYAPIILSAIGLIYFIPLKKKLSFSSEDKKVIFSFLFYFSTFLLSIIINKD
GIREIDNPSRLLLFIPLLLLFKNFPIKRKTILYAIPSSALITGCVALFQKFVLGYEKPFPETMHIQMGDIAISLAISSLI
ISIYFSIKKEYKSALFGMIGLILAVSTSALSGARGGWIGLPVVIGIILFLYKEDINKKLIITLVTVITIGLTALIANPKF
GIEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIKEAPIFGHGSNGYEEFRHRQVKSKQMAKTTLNFGSLHNQY
LESWVKRGLVGFIALILIILTPIFFFIKNLNTHNLETKCICILGIIHIVSHIFYFTSQSFLAHNSGNIFYFFNYLIFYCL
IKREKITR

Specific function: Adds The O-Antigen On The Glucose Group Of Lps. [C]

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007016 [H]

Pfam domain/function: PF04932 Wzy_C [H]

EC number: NA

Molecular weight: Translated: 46353; Mature: 46353

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQEKHLTFTINLLVSLFFLTVLVVPKGYNYAPIILSAIGLIYFIPLKKKLSFSSEDKKV
CCCCCCHHEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHH
IFSFLFYFSTFLLSIIINKDGIREIDNPSRLLLFIPLLLLFKNFPIKRKTILYAIPSSAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH
ITGCVALFQKFVLGYEKPFPETMHIQMGDIAISLAISSLIISIYFSIKKEYKSALFGMIG
HHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILAVSTSALSGARGGWIGLPVVIGIILFLYKEDINKKLIITLVTVITIGLTALIANPKF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
GIEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIKEAPIFGHGSNGYEEFRHRQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCEECCCCCCHHHHHHHH
VKSKQMAKTTLNFGSLHNQYLESWVKRGLVGFIALILIILTPIFFFIKNLNTHNLETKCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
CILGIIHIVSHIFYFTSQSFLAHNSGNIFYFFNYLIFYCLIKREKITR
HHHHHHHHHHHHHHHHCCHHHEECCCCEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQEKHLTFTINLLVSLFFLTVLVVPKGYNYAPIILSAIGLIYFIPLKKKLSFSSEDKKV
CCCCCCHHEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHH
IFSFLFYFSTFLLSIIINKDGIREIDNPSRLLLFIPLLLLFKNFPIKRKTILYAIPSSAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH
ITGCVALFQKFVLGYEKPFPETMHIQMGDIAISLAISSLIISIYFSIKKEYKSALFGMIG
HHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILAVSTSALSGARGGWIGLPVVIGIILFLYKEDINKKLIITLVTVITIGLTALIANPKF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
GIEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIKEAPIFGHGSNGYEEFRHRQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCEECCCCCCHHHHHHHH
VKSKQMAKTTLNFGSLHNQYLESWVKRGLVGFIALILIILTPIFFFIKNLNTHNLETKCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
CILGIIHIVSHIFYFTSQSFLAHNSGNIFYFFNYLIFYCLIKREKITR
HHHHHHHHHHHHHHHHCCHHHEECCCCEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]