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The map label for this gene is intA [C]

Identifier: 148826425

GI number: 148826425

Start: 1462892

End: 1463431

Strand: Direct

Name: intA [C]

Synonym: CGSHiEE_07360

Alternate gene names: 148826425

Gene position: 1462892-1463431 (Clockwise)

Preceding gene: 148826424

Following gene: 148826426

Centisome position: 80.69

GC content: 32.96

Gene sequence:

>540_bases
ATGGCTAGAGACTTTTCAAAAAAATTCACTGATTCTTATATTCATGGAATTAAACCAACCGATAAAGAGCAACTATTTTC
TGATAGGGATAAGGCTCGTATATGGTGCGGGCTATTGGCACAAGGTATAGATCCTGCTGAAGAAGAATGTATGCAGCAAG
AGGAGAAAGAGAAGAAATCTGTGACCTTTAAAGAGCTTGCTATGCTATGGCGTGATAAACGATTAAAGAAGGGTGAGTTA
AAAGAAAATAGTATTGAGAAAGTTTATAGAAGAGTAGAGCTTTATTTGTTTGATAGATTTAATTTTTCTAGATTGTTAGC
TAAAAATATTAATTTGAGATCTTTTGATAATGCTCTACTTCCCATAGAGGGAACAGGTATATGCGATAAGTTATGCATTG
CAATAAAACAAATATTTGATAATGCGATTGATGAAGGCGTGTTAGAAAATAATCCTTTTACAAGATTATCCAAAAGATTT
AAAAAGCCAATTACTAAGAATTTTCCATCAATACCGCCTAAGGAATTAATGGCGTTCTAG

Upstream 100 bases:

>100_bases
TTGTTCGTTTTTATTGTTCCCTTAAATGTTCCCTCTTTATGAAGGAACAAAAACGAGGGAACAGAAGAACGGTAAATTTT
TATTTATTAGGGTTTGAACA

Downstream 100 bases:

>100_bases
ACAAGAGATTATGCAGACGTGGGGAAATTATGTTGAGCAGTGCATTAGTCAATCTTGATGCGAAACAGCTCAACAGCCAA
AACGGCGCGCCAATCACCGC

Product: putative prophage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MARDFSKKFTDSYIHGIKPTDKEQLFSDRDKARIWCGLLAQGIDPAEEECMQQEEKEKKSVTFKELAMLWRDKRLKKGEL
KENSIEKVYRRVELYLFDRFNFSRLLAKNINLRSFDNALLPIEGTGICDKLCIAIKQIFDNAIDEGVLENNPFTRLSKRF
KKPITKNFPSIPPKELMAF

Sequences:

>Translated_179_residues
MARDFSKKFTDSYIHGIKPTDKEQLFSDRDKARIWCGLLAQGIDPAEEECMQQEEKEKKSVTFKELAMLWRDKRLKKGEL
KENSIEKVYRRVELYLFDRFNFSRLLAKNINLRSFDNALLPIEGTGICDKLCIAIKQIFDNAIDEGVLENNPFTRLSKRF
KKPITKNFPSIPPKELMAF
>Mature_178_residues
ARDFSKKFTDSYIHGIKPTDKEQLFSDRDKARIWCGLLAQGIDPAEEECMQQEEKEKKSVTFKELAMLWRDKRLKKGELK
ENSIEKVYRRVELYLFDRFNFSRLLAKNINLRSFDNALLPIEGTGICDKLCIAIKQIFDNAIDEGVLENNPFTRLSKRFK
KPITKNFPSIPPKELMAF

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20972; Mature: 20840

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDFSKKFTDSYIHGIKPTDKEQLFSDRDKARIWCGLLAQGIDPAEEECMQQEEKEKKS
CCCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
VTFKELAMLWRDKRLKKGELKENSIEKVYRRVELYLFDRFNFSRLLAKNINLRSFDNALL
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
PIEGTGICDKLCIAIKQIFDNAIDEGVLENNPFTRLSKRFKKPITKNFPSIPPKELMAF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCC
>Mature Secondary Structure 
ARDFSKKFTDSYIHGIKPTDKEQLFSDRDKARIWCGLLAQGIDPAEEECMQQEEKEKKS
CCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
VTFKELAMLWRDKRLKKGELKENSIEKVYRRVELYLFDRFNFSRLLAKNINLRSFDNALL
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
PIEGTGICDKLCIAIKQIFDNAIDEGVLENNPFTRLSKRFKKPITKNFPSIPPKELMAF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA