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The map label for this gene is xylH [H]

Identifier: 148826276

GI number: 148826276

Start: 1291687

End: 1292814

Strand: Direct

Name: xylH [H]

Synonym: CGSHiEE_06515

Alternate gene names: 148826276

Gene position: 1291687-1292814 (Clockwise)

Preceding gene: 148826275

Following gene: 148826277

Centisome position: 71.24

GC content: 38.48

Gene sequence:

>1128_bases
ATGTTTAAGTTAAAATCCGTAAATTTACAAGTTTACATTATGTTAATAGCTATTGCCGTCATTATGGCATTCTTTAGTGT
TGCTACTGATGGCGCTTATTTAAGTGCAAGAAATATTTCTAACTTGTTACGCCAAACTTCAATTACTGGCATTCTTGCAA
TTGGAATGGTTTTTGTCATTATTTCTGCTGAAATTGACTTATCTGTTGGTTCACTTATGGGCCTACTGGGCGGATTTGCA
GCTATTGCCGATGTTTGGTGGGGCTTCCCATTACCTGTAACTATTATTGCAACAATTGCTCTTGGTTTAATTTTTGGTAT
TTGGAATGGTTGGTGGGTGGCTTATCGCAAAGTGCCATCCTTTATTGTTACACTTGCAGGTTATCTCGCATTCCGTGGAA
TTTTGATTGGTTTGACTAATGGCACAACTGTATCTCCTATTAGTGGATCTATGACAGTTATTGGACAAGGTTATTTATCA
GATATTGCAGGGTTTATCTTAGGTGGTATTGCAGTTATTGGATTTGTTCTTTGGGGAAATTATCAACGTAGAAGTCGCCA
GCAGCTTCAGCTGGAAGTGTCTGCATTATCAAAAGATTTTACGAAATATGCTTTGTTTGCAGTAATTGTATTAGGAGCAA
TTTATTTACTTAATGATTATCGTGGCATTCCATTTCCTGTTTTAGTACTGGCAGTTCTTGCAATCTTAGGGTTATTCCTC
TCTCGTAAAACTTCATTCGGCCGCCACGTTTATGCGATTGGTGGCAATATTGATGCGGCAAAATTATCTGGTATCAATGT
AGAGAAAACAAAACTGATTATCTTTGCAATGAATGGTGTGTTAGTTGCAATAGCAGGGTTGATTTTAAGTGCTCGTTTAG
GTGCAGGCTCACCATCTGCTGGGCAAAATGCAGAACTAGATGCGATTGCAGCTTGTGTAATTGGAGGGGCAAGCTTAGCG
GGTGGTGTAGGAAGTGTGTTTGGGGTTGTTATTGGCGCACTTATCATCGCATCGCTTGATAATGGTATGAGTATGCTTGA
TGTGCCAACTTTTTGGCAATATATTGTCAAAGGTGCCATTTTGTTACTTGCTGTATGGATAGATACTAGTAATAAGAAAA
AGATGTAA

Upstream 100 bases:

>100_bases
TAGAGTTCTTGTTATGCACCAAGGTAAACTTAAAGCTAGTCTTATCAATACTGCTCTTACTCAAGAACAAGTTATGGAAA
CAGCACTTAAGGAGTAATCT

Downstream 100 bases:

>100_bases
TTATTAATTTTAAACCGTCATTTATAAAATGGCGGTTTTTTAATTTTATAGAAATGGTTACCTAACATACTGCTTTCTAG
ATGATGAAGTTTTTCATCTT

Product: D-xylose ABC transporter permease protein

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MFKLKSVNLQVYIMLIAIAVIMAFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFA
AIADVWWGFPLPVTIIATIALGLIFGIWNGWWVAYRKVPSFIVTLAGYLAFRGILIGLTNGTTVSPISGSMTVIGQGYLS
DIAGFILGGIAVIGFVLWGNYQRRSRQQLQLEVSALSKDFTKYALFAVIVLGAIYLLNDYRGIPFPVLVLAVLAILGLFL
SRKTSFGRHVYAIGGNIDAAKLSGINVEKTKLIIFAMNGVLVAIAGLILSARLGAGSPSAGQNAELDAIAACVIGGASLA
GGVGSVFGVVIGALIIASLDNGMSMLDVPTFWQYIVKGAILLLAVWIDTSNKKKM

Sequences:

>Translated_375_residues
MFKLKSVNLQVYIMLIAIAVIMAFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFA
AIADVWWGFPLPVTIIATIALGLIFGIWNGWWVAYRKVPSFIVTLAGYLAFRGILIGLTNGTTVSPISGSMTVIGQGYLS
DIAGFILGGIAVIGFVLWGNYQRRSRQQLQLEVSALSKDFTKYALFAVIVLGAIYLLNDYRGIPFPVLVLAVLAILGLFL
SRKTSFGRHVYAIGGNIDAAKLSGINVEKTKLIIFAMNGVLVAIAGLILSARLGAGSPSAGQNAELDAIAACVIGGASLA
GGVGSVFGVVIGALIIASLDNGMSMLDVPTFWQYIVKGAILLLAVWIDTSNKKKM
>Mature_375_residues
MFKLKSVNLQVYIMLIAIAVIMAFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFA
AIADVWWGFPLPVTIIATIALGLIFGIWNGWWVAYRKVPSFIVTLAGYLAFRGILIGLTNGTTVSPISGSMTVIGQGYLS
DIAGFILGGIAVIGFVLWGNYQRRSRQQLQLEVSALSKDFTKYALFAVIVLGAIYLLNDYRGIPFPVLVLAVLAILGLFL
SRKTSFGRHVYAIGGNIDAAKLSGINVEKTKLIIFAMNGVLVAIAGLILSARLGAGSPSAGQNAELDAIAACVIGGASLA
GGVGSVFGVVIGALIIASLDNGMSMLDVPTFWQYIVKGAILLLAVWIDTSNKKKM

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=371, Percent_Identity=70.6199460916442, Blast_Score=488, Evalue=1e-139,
Organism=Escherichia coli, GI1790191, Length=361, Percent_Identity=36.2880886426593, Blast_Score=161, Evalue=7e-41,
Organism=Escherichia coli, GI1788896, Length=372, Percent_Identity=32.5268817204301, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1790524, Length=351, Percent_Identity=31.3390313390313, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI145693152, Length=156, Percent_Identity=46.7948717948718, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1787793, Length=336, Percent_Identity=27.6785714285714, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788471, Length=370, Percent_Identity=31.6216216216216, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082395, Length=109, Percent_Identity=46.7889908256881, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI145693214, Length=310, Percent_Identity=30, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1787794, Length=334, Percent_Identity=27.8443113772455, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39561; Mature: 39561

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLKSVNLQVYIMLIAIAVIMAFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVI
CCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ISAEIDLSVGSLMGLLGGFAAIADVWWGFPLPVTIIATIALGLIFGIWNGWWVAYRKVPS
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVTLAGYLAFRGILIGLTNGTTVSPISGSMTVIGQGYLSDIAGFILGGIAVIGFVLWGN
HHHHHHHHHHHHHHEEEECCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCC
YQRRSRQQLQLEVSALSKDFTKYALFAVIVLGAIYLLNDYRGIPFPVLVLAVLAILGLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SRKTSFGRHVYAIGGNIDAAKLSGINVEKTKLIIFAMNGVLVAIAGLILSARLGAGSPSA
HCCCCCCCEEEEECCCCCHHHCCCCCEEHHEEEEEEHHHHHHHHHHHHHHHHCCCCCCCC
GQNAELDAIAACVIGGASLAGGVGSVFGVVIGALIIASLDNGMSMLDVPTFWQYIVKGAI
CCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLLAVWIDTSNKKKM
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MFKLKSVNLQVYIMLIAIAVIMAFFSVATDGAYLSARNISNLLRQTSITGILAIGMVFVI
CCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ISAEIDLSVGSLMGLLGGFAAIADVWWGFPLPVTIIATIALGLIFGIWNGWWVAYRKVPS
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVTLAGYLAFRGILIGLTNGTTVSPISGSMTVIGQGYLSDIAGFILGGIAVIGFVLWGN
HHHHHHHHHHHHHHEEEECCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCC
YQRRSRQQLQLEVSALSKDFTKYALFAVIVLGAIYLLNDYRGIPFPVLVLAVLAILGLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SRKTSFGRHVYAIGGNIDAAKLSGINVEKTKLIIFAMNGVLVAIAGLILSARLGAGSPSA
HCCCCCCCEEEEECCCCCHHHCCCCCEEHHEEEEEEHHHHHHHHHHHHHHHHCCCCCCCC
GQNAELDAIAACVIGGASLAGGVGSVFGVVIGALIIASLDNGMSMLDVPTFWQYIVKGAI
CCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLLAVWIDTSNKKKM
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]