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The map label for this gene is 148825846

Identifier: 148825846

GI number: 148825846

Start: 827777

End: 828118

Strand: Direct

Name: 148825846

Synonym: CGSHiEE_04025

Alternate gene names: NA

Gene position: 827777-828118 (Clockwise)

Preceding gene: 148825845

Following gene: 148825847

Centisome position: 45.66

GC content: 32.46

Gene sequence:

>342_bases
ATGTTAGTTGATTTACATATTTTTTTCGCCTTTTTAAGTTTGGCATTGTTAGTAATTCGTGGTGCAATGCAGCTTAATGG
TAAAAATTGGCGTTCGATAAAATTATTAAAAATTTTACCGCACTTATCAGATACCTTGCTGATTGTGTCTGGCGTCGTCA
TTTTATACCTCTTTGCTTTTGGTATTGAATGGTGGTTAGTGGCTAAATTCGCATTACTGATTTTGTATATTGTGTTTGCT
GCAAAATTTTTCAGTAAAAAAGTTTCTCAACCCAAAAGCATTTTCTTTTGGCTTGCTTGCGTAAGTTTTATTGGTGCGAT
GTTAATTGCCTATTTAAAATAA

Upstream 100 bases:

>100_bases
CAGCCACATCGTATTAAATATAAACGTATTGCGAAGTAATTTAGATTGAGAAAGTGCGGTGGATTTTGACCGCACTTTTC
TTACTTTTTTGGGAGTGATT

Downstream 100 bases:

>100_bases
AACGATGTCATCTCGCCAGCTTCAAATTTTAATCTGCAAAACTTTGCCGCTTGTGCCTGATAACGTATTAATTATCGGCG
AAAGTGGCATTGCTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MLVDLHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILPHLSDTLLIVSGVVILYLFAFGIEWWLVAKFALLILYIVFA
AKFFSKKVSQPKSIFFWLACVSFIGAMLIAYLK

Sequences:

>Translated_113_residues
MLVDLHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILPHLSDTLLIVSGVVILYLFAFGIEWWLVAKFALLILYIVFA
AKFFSKKVSQPKSIFFWLACVSFIGAMLIAYLK
>Mature_113_residues
MLVDLHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILPHLSDTLLIVSGVVILYLFAFGIEWWLVAKFALLILYIVFA
AKFFSKKVSQPKSIFFWLACVSFIGAMLIAYLK

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007360 [H]

Pfam domain/function: PF04247 SirB [H]

EC number: NA

Molecular weight: Translated: 12898; Mature: 12898

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVDLHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILPHLSDTLLIVSGVVILYLFAF
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEWWLVAKFALLILYIVFAAKFFSKKVSQPKSIFFWLACVSFIGAMLIAYLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVDLHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILPHLSDTLLIVSGVVILYLFAF
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEWWLVAKFALLILYIVFAAKFFSKKVSQPKSIFFWLACVSFIGAMLIAYLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]