Click here to switch to the map view.

The map label for this gene is proA

Identifier: 148825835

GI number: 148825835

Start: 812550

End: 813380

Strand: Direct

Name: proA

Synonym: CGSHiEE_03950

Alternate gene names: NA

Gene position: 812550-813380 (Clockwise)

Preceding gene: 148825832

Following gene: 148825840

Centisome position: 44.82

GC content: 35.26

Gene sequence:

>831_bases
ATGGTGCATTATTTTTCAGTCGTCAAAATTATGTCAGAACAATCTTCTAAATATATCGCAGCATTGCTTGCGGTATTATC
GATCTCAATGGTGCTTGGCATCGATCTATTTATTTTTTCTTTGCAATCTGAAAAGCAAACAATGCCTCATTTAGGTGTAG
GCGTGTTGGTTGCACAGTTAATTTCTTTATTGGTGTTTTATCGTGGCGAAATTTGCCCAGGGCAGCGTGGTCGTTTAATC
AAAGTGAATATGACTTTTGCTATTTATTGGGCAGTGTGGTTGCTGATAAGCCTATTACAAAATAATCACACGCTTACTAA
CGTGATGAGCGTATGTGGTCTTTCTGTCGTGTATTTTATTTGGAAACAACCCAAAACTGAAAAAATCCGTAACAGTTTTT
TATTGATGGCTGCATTAATTGCGGGTTTAGGTTGTTTGAGTTATTTAATGATTTTTACCGTGCTTCCTGCGAGTGATTTT
GCTGAATATAACCCTTTTGCACCAATTTTATCTGGCGTGATTTTAGCAAATCTTGCGCTTGTTATTGCACGAAATCGTTT
ACAAGGTTTTATAGCATTGTTGCCTTTAGCAATGATTATATTGCTTGCTCTAAATGCTTTGGCAATGTTTTTATTTTTAC
TTTTAAATGGTATGGAAAGTGCGGTTAATTCTGAGAGTGTTTTTGCCTACATCATTTATTTTGTTTGCCATTTTGTGATT
GCGGCTATTCTGATTCTGCATAGTTTCCAAAAGTGGACATTATCTACCAATAGTTTATTTATCCTATTATTTATTGCTGT
TTGCTTGCCGTTATGGATGGTTTTTGTTTAA

Upstream 100 bases:

>100_bases
TGATACCGATGATATATAAAATACTAAGTAACATTCATGTACCTAAGTGCGGTTAAAATTGGTTTCATTTTACTTTAAAA
TTTAATGAATTTTTAGCATA

Downstream 100 bases:

>100_bases
TAAAGAAAACAATCATTGCGCCGTGGGGAATTTACCCACGGCTTTTAAGATTTCGGCTGGTTAGAAAGTAATACGCCAAC
ACGGAAATCACGACACATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MVHYFSVVKIMSEQSSKYIAALLAVLSISMVLGIDLFIFSLQSEKQTMPHLGVGVLVAQLISLLVFYRGEICPGQRGRLI
KVNMTFAIYWAVWLLISLLQNNHTLTNVMSVCGLSVVYFIWKQPKTEKIRNSFLLMAALIAGLGCLSYLMIFTVLPASDF
AEYNPFAPILSGVILANLALVIARNRLQGFIALLPLAMIILLALNALAMFLFLLLNGMESAVNSESVFAYIIYFVCHFVI
AAILILHSFQKWTLSTNSLFILLFIAVCLPLWMVFV

Sequences:

>Translated_276_residues
MVHYFSVVKIMSEQSSKYIAALLAVLSISMVLGIDLFIFSLQSEKQTMPHLGVGVLVAQLISLLVFYRGEICPGQRGRLI
KVNMTFAIYWAVWLLISLLQNNHTLTNVMSVCGLSVVYFIWKQPKTEKIRNSFLLMAALIAGLGCLSYLMIFTVLPASDF
AEYNPFAPILSGVILANLALVIARNRLQGFIALLPLAMIILLALNALAMFLFLLLNGMESAVNSESVFAYIIYFVCHFVI
AAILILHSFQKWTLSTNSLFILLFIAVCLPLWMVFV
>Mature_276_residues
MVHYFSVVKIMSEQSSKYIAALLAVLSISMVLGIDLFIFSLQSEKQTMPHLGVGVLVAQLISLLVFYRGEICPGQRGRLI
KVNMTFAIYWAVWLLISLLQNNHTLTNVMSVCGLSVVYFIWKQPKTEKIRNSFLLMAALIAGLGCLSYLMIFTVLPASDF
AEYNPFAPILSGVILANLALVIARNRLQGFIALLPLAMIILLALNALAMFLFLLLNGMESAVNSESVFAYIIYFVCHFVI
AAILILHSFQKWTLSTNSLFILLFIAVCLPLWMVFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30798; Mature: 30798

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]