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The map label for this gene is yciH [C]

Identifier: 148825819

GI number: 148825819

Start: 792836

End: 793156

Strand: Direct

Name: yciH [C]

Synonym: CGSHiEE_03860

Alternate gene names: 148825819

Gene position: 792836-793156 (Clockwise)

Preceding gene: 148825818

Following gene: 148825825

Centisome position: 43.73

GC content: 35.83

Gene sequence:

>321_bases
ATGTCAGATTCTGTTTTAGTGTATTCAACAGATGTGGGTCGAATTAAAGAGGAAAAGGCTTCTGTAGTTCGCCCAAAAGG
AGACGGTGTTGTACGTATTCAAAAACAAACGAGTGGTAGAAAAGGTGCTGGCGTATCAGTTATAACTGGTTTAGATTTAT
CTGATGAGGAATTGAAAAAATTAGCTGCTGAATTAAAAAAACGTTGTGGATGTGGTGGAGCAGTTAAAAATGGTATTATT
GAAATTCAAGGGGAAAAACGAGATTTGCTCAAGCAATTATTAGAGCAAAAAGGGTTTAAAGTTAAATTATCAGGTGGATG
A

Upstream 100 bases:

>100_bases
TGCAGGTTCAGATTATTTAGTTATTGGACGCCCAATAACTCAAGCGGATAATCCTGCGGAGGTTCTCCGTTCTATTAATG
TATCTATTGGGTAATTATAA

Downstream 100 bases:

>100_bases
TTAAAAAGGCGCATTAGTGCCTTTTTTGTTAGAGATTCAAAATTTTTTTGACGAAAGGAATCGTAAGATTTCGTTGAGCT
TGTAATGATGCTTTATCTAG

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSDSVLVYSTDVGRIKEEKASVVRPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGGAVKNGII
EIQGEKRDLLKQLLEQKGFKVKLSGG

Sequences:

>Translated_106_residues
MSDSVLVYSTDVGRIKEEKASVVRPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGGAVKNGII
EIQGEKRDLLKQLLEQKGFKVKLSGG
>Mature_105_residues
SDSVLVYSTDVGRIKEEKASVVRPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKKLAAELKKRCGCGGAVKNGIIE
IQGEKRDLLKQLLEQKGFKVKLSGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family

Homologues:

Organism=Escherichia coli, GI87081867, Length=105, Percent_Identity=77.1428571428572, Blast_Score=159, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1225_HAEIN (P45116)

Other databases:

- EMBL:   L42023
- PIR:   C64111
- RefSeq:   NP_439381.1
- ProteinModelPortal:   P45116
- SMR:   P45116
- GeneID:   950401
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1225
- NMPDR:   fig|71421.1.peg.1171
- TIGR:   HI_1225
- HOGENOM:   HBG706849
- OMA:   IEIQGDN
- ProtClustDB:   PRK09019
- BioCyc:   HINF71421:HI_1225-MONOMER
- InterPro:   IPR005872
- InterPro:   IPR001950
- PIRSF:   PIRSF037511
- TIGRFAMs:   TIGR01158

Pfam domain/function: PF01253 SUI1; SSF55159 TIF_SUI1

EC number: NA

Molecular weight: Translated: 11326; Mature: 11195

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVLVYSTDVGRIKEEKASVVRPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKK
CCCCEEEEECCCCHHHHHHHHEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHH
LAAELKKRCGCGGAVKNGIIEIQGEKRDLLKQLLEQKGFKVKLSGG
HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure 
SDSVLVYSTDVGRIKEEKASVVRPKGDGVVRIQKQTSGRKGAGVSVITGLDLSDEELKK
CCCEEEEECCCCHHHHHHHHEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHH
LAAELKKRCGCGGAVKNGIIEIQGEKRDLLKQLLEQKGFKVKLSGG
HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800