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The map label for this gene is yiaM [C]

Identifier: 148825669

GI number: 148825669

Start: 614741

End: 615175

Strand: Direct

Name: yiaM [C]

Synonym: CGSHiEE_03045

Alternate gene names: 148825669

Gene position: 614741-615175 (Clockwise)

Preceding gene: 148825668

Following gene: 148825670

Centisome position: 33.91

GC content: 30.57

Gene sequence:

>435_bases
ATGAAAATAGCAAAGTATTTAGACAAAGCATTAGAATATCTTTCTATCTTGGCATTAGTTATTATGATTTCTCTCGTGTT
TTTTAATTCTGTCTTGAGGTACTTCTTTGATTCTGGAATTGCATTTTCTGAAGAGTTTTCTAGGATTTGTTTTGTATATA
TGATTTTCTTTGGGATTATACTTGTTGCCAAGGATAAAGCTCATCTTACTGTTGATATTATTATTTCTGCGTTGCCTGAG
CAGTATAGAAAAATAGTCTTAATAGTTGCAAATATATGCGTTCTGATTGCAATGATTTTTATAGCTTATGGTGCATTACA
ACTGATGTCTTTGACCTATACTCAACAAATGCCAGCTACAGGTATATCTTCATTCTTTTTTATATTTAGCTGCTGTTATA
TCTGCCGTATCTTACTTTTTTATTGTCATGTTTAG

Upstream 100 bases:

>100_bases
AGGATGTAGTCCAAAAAATTAACGAAGCTAAATAATTAATAAGATCCCCTATGTTCAATTTTATAAATTGCTCATGGGGG
ATAAAGAAGGAGCTTGTTTT

Downstream 100 bases:

>100_bases
CATGATTAAAGACTATAAAGAATCCTCTGATAAATAGGAGCTTATAATGTTACTATTATTTTTGTGTAGTTTATTCTTAT
TGTTATTTCTTGGTGTACCT

Product: putative TRAP-type C4-dicarboxylate transport system, small permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMIFFGIILVAKDKAHLTVDIIISALPE
QYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPATGISSFFFIFSCCYICRILLFYCHV

Sequences:

>Translated_144_residues
MKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMIFFGIILVAKDKAHLTVDIIISALPE
QYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPATGISSFFFIFSCCYICRILLFYCHV
>Mature_144_residues
MKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMIFFGIILVAKDKAHLTVDIIISALPE
QYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPATGISSFFFIFSCCYICRILLFYCHV

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 16528; Mature: 16528

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMIFFGII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LVAKDKAHLTVDIIISALPEQYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPAT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GISSFFFIFSCCYICRILLFYCHV
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAKYLDKALEYLSILALVIMISLVFFNSVLRYFFDSGIAFSEEFSRICFVYMIFFGII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LVAKDKAHLTVDIIISALPEQYRKIVLIVANICVLIAMIFIAYGALQLMSLTYTQQMPAT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GISSFFFIFSCCYICRILLFYCHV
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]