BacMap

Definition	Haemophilus influenzae PittEE chromosome, complete genome.
Accession	NC_009566
Length	1,813,033

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The map label for this gene is srmB [H]

Identifier: 148825298

GI number: 148825298

Start: 169060

End: 170379

Strand: Direct

Name: srmB [H]

Synonym: CGSHiEE_00890

Alternate gene names: 148825298

Gene position: 169060-170379 (Clockwise)

Preceding gene: 148825296

Following gene: 148825300

Centisome position: 9.32

GC content: 42.05

Gene sequence:

>1320_bases
ATGAATTTATCCCAATTTGAACAATTCGATCTTTCTCCAGAGCTTTTAAAGGCGCTTGAAAAAAAAGGTTATTCCCGCCC
AACCGCTATTCAAATGGAAGCCATTCCTGCCGCAATGGAAGAGCGTGATGTATTAGGCTCGGCACCAACGGGAACAGGGA
AAACCGCTGCTTTTTTATTACCTGCGCTACAACATTTATTGGATTATCCGCGTCGTAAACCAGGTCCACCGCGTATTTTG
GTATTAACACCAACCCGCGAACTGGCAATGCAAGTGGCTGAACAAGCGGAAGAATTAGCGCAGTTCACCCATTTAAATAT
TGCGACAATTACAGGTGGCGTGGCGTATCAAAATCACGGTGATGTATTCAATACCAATCAAGATTTGGTGGTGGCAACGC
CCGGTCGTTTATTGCAATACATTAAGGAAGAAAATTTTGATTGCCGTTCCGTTGAAATGCTGATTTTTGATGAAGCCGAT
AGAATGTTACAAATGGGATTTGGGCAAGATGCGGAAAAAATTGCAGCTGAAACCCGTTGGCGAAAACAAACTTTGTTGTT
TTCTGCAACCTTAGAAGGGGAGCTATTGGTCGATTTCGCGGAGCGTTTATTGAATGATCCTGTGAAAGTAGATGCGGAAC
CAAGCCGTCGAGAGAGAAAAAAAATCAACCAATGGTATTACCACGCAGACAGCAATGAACACAAAATCAAATTGCTCGCG
CGTTTTATTGAAACTGAAGAAGTGACGCGTGGAATTGTGTTTGTTCGCCGTCGTGAAGATGCGCGTGAACTTTCCGAAAC
ATTGCGTAAACGAGGCATTCGTTCCGCATATTTAGAAGGCGAAATGGCACAAACTCAACGTAACAATGCCATTGATAAAT
TGAAATCAGGTATTGTGACGGTATTGGTTGCAACGGATGTGGCTGCACGTGGTATTGATATTGATGATGTAAGCCATGTA
ATGAATTTTGATTTGCCCTATAGTGCGGATACTTATTTACATCGAATTGGACGTACCGCACGAGCTGGCAAAAAAGGCAC
GGCAGTCTCTTTTGTCGAAGCGCATGATTACAAGTTACTTGGTAAAATCAAACGTTATACAGAGGAAATTTTAAAGGCGC
GCATTTTAGCAGGTTTAGAACCTCGCACTAAGCCACCAAAAGATGGTGAAGTGAAATCGGTCAGCAAAAAACAAAAGGCA
CGCATTAAAGAAAAACGTGAAGATAAGAAAAAAACAGAGGCAAAGAAAAAAGTAAAATTGCGTCATAAGGATACGAAAAA
TATCGGCAAACGACGCAAGCCAAGTAACAGTAATGTTTAA

Upstream 100 bases:

>100_bases
TATGGAATTGTTTAAAGGTAAATCCGCTCATAAATTTTTCGTAAATTGACCGTACTTTCAGGTATAATCCTCGCCAATTT
TAACAAAGAACCGCACAATA

Downstream 100 bases:

>100_bases
TTAGGTGTGATTTAAATTCTGTTTTATATCACACTAGCAATGTGGGTTTCTTGTATTGGTATTAACTAAATTACGCATTA
ATAAAGCGTAATTTAAGTTA

Product: ATP-dependent RNA helicase SrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRIL
VLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEAD
RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDIDDVSHV
MNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREDKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV

Sequences:

>Translated_439_residues
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRIL
VLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEAD
RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDIDDVSHV
MNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREDKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV
>Mature_439_residues
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRIL
VLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEAD
RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDIDDVSHV
MNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREDKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV

Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=35.6948228882834, Blast_Score=238, Evalue=6e-63,
Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=35.6948228882834, Blast_Score=238, Evalue=6e-63,
Organism=Homo sapiens, GI224593278, Length=382, Percent_Identity=38.2198952879581, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI20149629, Length=434, Percent_Identity=34.331797235023, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=37.4285714285714, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=37.4285714285714, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI31542656, Length=449, Percent_Identity=34.9665924276169, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI41327771, Length=387, Percent_Identity=33.0749354005168, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI7661920, Length=361, Percent_Identity=31.8559556786704, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=34.3575418994413, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI148613856, Length=382, Percent_Identity=32.9842931937173, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI38201710, Length=382, Percent_Identity=32.9842931937173, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI188035877, Length=378, Percent_Identity=35.1851851851852, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI41327773, Length=380, Percent_Identity=33.1578947368421, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=34.1463414634146, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI41327776, Length=434, Percent_Identity=32.0276497695853, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI55749865, Length=361, Percent_Identity=33.2409972299169, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=34.5403899721448, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI8922886, Length=377, Percent_Identity=33.42175066313, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI6005743, Length=377, Percent_Identity=33.6870026525199, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=35.0974930362117, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=35.0974930362117, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=35.0974930362117, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI21071032, Length=373, Percent_Identity=31.6353887399464, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI21040371, Length=367, Percent_Identity=32.1525885558583, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=32.033426183844, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=33.2432432432432, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI4758112, Length=367, Percent_Identity=32.425068119891, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI18375623, Length=367, Percent_Identity=32.425068119891, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=33.2432432432432, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=33.2432432432432, Blast_Score=191, Evalue=8e-49,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=33.6021505376344, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=33.6021505376344, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI62241022, Length=356, Percent_Identity=33.9887640449438, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=32.5396825396825, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI38569505, Length=371, Percent_Identity=32.8840970350404, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI13514831, Length=352, Percent_Identity=34.6590909090909, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI9506931, Length=405, Percent_Identity=32.3456790123457, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=31.4207650273224, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=30.8743169398907, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI62241024, Length=335, Percent_Identity=33.7313432835821, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=31.043956043956, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI50659095, Length=370, Percent_Identity=31.0810810810811, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=29.4429708222812, Blast_Score=165, Evalue=6e-41,
Organism=Homo sapiens, GI38327634, Length=334, Percent_Identity=32.9341317365269, Blast_Score=162, Evalue=8e-40,
Organism=Homo sapiens, GI41327779, Length=371, Percent_Identity=34.5013477088949, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=30.6179775280899, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI9966805, Length=327, Percent_Identity=30.8868501529052, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI17505907, Length=403, Percent_Identity=28.287841191067, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI154759257, Length=410, Percent_Identity=29.0243902439024, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=27.893175074184, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI256773275, Length=417, Percent_Identity=29.0167865707434, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=33.0232558139535, Blast_Score=105, Evalue=1e-22,
Organism=Escherichia coli, GI1788930, Length=439, Percent_Identity=66.5148063781321, Blast_Score=561, Evalue=1e-161,
Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=39.6825396825397, Blast_Score=275, Evalue=5e-75,
Organism=Escherichia coli, GI87082221, Length=363, Percent_Identity=41.5977961432507, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=37.6, Blast_Score=241, Evalue=9e-65,
Organism=Escherichia coli, GI1787605, Length=343, Percent_Identity=37.3177842565598, Blast_Score=207, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=35.8490566037736, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17510559, Length=405, Percent_Identity=35.0617283950617, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI86570094, Length=392, Percent_Identity=36.9897959183673, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI17555296, Length=419, Percent_Identity=35.0835322195704, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=36.9627507163324, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=36.9627507163324, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI71995724, Length=361, Percent_Identity=32.6869806094183, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=32.409972299169, Blast_Score=220, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI32565321, Length=394, Percent_Identity=34.5177664974619, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=32.5136612021858, Blast_Score=216, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI115533224, Length=353, Percent_Identity=36.2606232294618, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=33.6065573770492, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=33.6065573770492, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=33.6065573770492, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=34.0314136125654, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI17537549, Length=368, Percent_Identity=33.695652173913, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=402, Percent_Identity=32.3383084577114, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17507877, Length=379, Percent_Identity=32.7176781002639, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=33.0601092896175, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17552114, Length=386, Percent_Identity=30.3108808290155, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17507881, Length=382, Percent_Identity=31.413612565445, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI115532548, Length=380, Percent_Identity=31.5789473684211, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17507879, Length=381, Percent_Identity=32.0209973753281, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=31.5789473684211, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI71982858, Length=367, Percent_Identity=31.0626702997275, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=32.9145728643216, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=31.2335958005249, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=31.496062992126, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=31.758530183727, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI17556951, Length=375, Percent_Identity=31.2, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI25148203, Length=422, Percent_Identity=27.4881516587678, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=29.0666666666667, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17505370, Length=343, Percent_Identity=32.6530612244898, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=32.5333333333333, Blast_Score=161, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=29.512893982808, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=30.1047120418848, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71990816, Length=387, Percent_Identity=30.2325581395349, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=27.3743016759777, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI25148205, Length=349, Percent_Identity=26.3610315186246, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25148291, Length=423, Percent_Identity=23.4042553191489, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71982862, Length=220, Percent_Identity=31.8181818181818, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=37.9213483146067, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6321856, Length=380, Percent_Identity=35, Blast_Score=219, Evalue=9e-58,
Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=33.0645161290323, Blast_Score=217, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6324217, Length=365, Percent_Identity=32.3287671232877, Blast_Score=213, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6321360, Length=368, Percent_Identity=34.7826086956522, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=33.8842975206612, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=32.4175824175824, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=31.2997347480106, Blast_Score=193, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=34.7368421052632, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=371, Percent_Identity=33.9622641509434, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6320449, Length=389, Percent_Identity=31.8766066838046, Blast_Score=189, Evalue=8e-49,
Organism=Saccharomyces cerevisiae, GI6324620, Length=380, Percent_Identity=30.5263157894737, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=31.4917127071823, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=31.4917127071823, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=31.5104166666667, Blast_Score=182, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6319618, Length=406, Percent_Identity=29.8029556650246, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=29.1566265060241, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6321267, Length=360, Percent_Identity=31.9444444444444, Blast_Score=166, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6320173, Length=210, Percent_Identity=41.4285714285714, Blast_Score=160, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=28.2722513089005, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6320400, Length=447, Percent_Identity=29.7539149888143, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=28.0653950953678, Blast_Score=144, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=27.5568181818182, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6322876, Length=184, Percent_Identity=29.8913043478261, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=38.7267904509284, Blast_Score=254, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=35.8695652173913, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=36.7521367521368, Blast_Score=231, Evalue=8e-61,
Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=35.8757062146893, Blast_Score=224, Evalue=7e-59,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=37.0056497175141, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=34.8189415041783, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24642151, Length=380, Percent_Identity=33.9473684210526, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=34.2541436464088, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=34.2541436464088, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=34.2541436464088, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=34.2541436464088, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=34.2541436464088, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=34.2541436464088, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=34.2541436464088, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=34.4444444444444, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=32.6869806094183, Blast_Score=215, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24584994, Length=385, Percent_Identity=34.5454545454545, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=32.9700272479564, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=32.9700272479564, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=31.7808219178082, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=35.2150537634409, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI17977678, Length=362, Percent_Identity=31.767955801105, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24581954, Length=367, Percent_Identity=32.6975476839237, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24581952, Length=367, Percent_Identity=32.6975476839237, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24581956, Length=367, Percent_Identity=32.6975476839237, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=35.2564102564103, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24666101, Length=437, Percent_Identity=31.8077803203661, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI17136814, Length=375, Percent_Identity=34.9333333333333, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24642822, Length=367, Percent_Identity=33.7874659400545, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=30.4709141274238, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=30.4709141274238, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=30.4709141274238, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=30.4709141274238, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=33.3333333333333, Blast_Score=164, Evalue=8e-41,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=29.6398891966759, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=29.6398891966759, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=30.1020408163265, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI20130173, Length=456, Percent_Identity=27.1929824561404, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=27.8089887640449, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI17136666, Length=399, Percent_Identity=31.077694235589, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI19920478, Length=362, Percent_Identity=29.2817679558011, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24640164, Length=376, Percent_Identity=25, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24668515, Length=338, Percent_Identity=28.9940828402367, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI18859659, Length=225, Percent_Identity=31.1111111111111, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28571338, Length=225, Percent_Identity=31.1111111111111, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49847; Mature: 49847

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLL
CCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHH
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEECCEEECCCC
DVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
CCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
HHHHEEEEECCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHEEECCCCCHHHHHHH
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCEE
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
EEEEHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
GKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKEKREDKKKTEAKKKVKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHKDTKNIGKRRKPSNSNV
HCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEERDVLGSAPTGTGKTAAFLL
CCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHH
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEECCEEECCCC
DVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
CCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
HHHHEEEEECCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHEEECCCCCHHHHHHH
RFIETEEVTRGIVFVRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCEE
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
EEEEHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
GKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKEKREDKKKTEAKKKVKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHKDTKNIGKRRKPSNSNV
HCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]