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The map label for this gene is 148824616

Identifier: 148824616

GI number: 148824616

Start: 3838283

End: 3840019

Strand: Reverse

Name: 148824616

Synonym: TBFG_13443

Alternate gene names: NA

Gene position: 3840019-3838283 (Counterclockwise)

Preceding gene: 148824617

Following gene: 148824613

Centisome position: 86.79

GC content: 66.72

Gene sequence:

>1737_bases
ATGAAGCCGGATTACGACGTCCTGATTATTGGATCGGGTTTCGGGGGCAGCGTCACCGCGCTGCGGCTGACGGAAAAGGG
CTACCGGGTCGGCGTGCTGGAGGCCGGCCGCCGGTTCTCCGACGAGGAGTTCGCCAAGACGTCGTGGGACCTGCGCAAGT
TTCTCTGGGCGCCGAGGTTGGGCTGCTATGGCATTCAACGTATCCACCCGCTGCGCAACGTGATGATCCTGGCCGGCGCC
GGGGTGGGCGGGGGCTCCCTCAACTACGCCAACACGTTGTACGTGCCGCCGGAGCCGTTCTTCGCCGACCAGCAGTGGTC
ACACATCACCGACTGGCGTGGCGAGCTGATGCCGCACTACCAGCAGGCGCAGCGGATGCTCGGGGTGGTGCAAAACCCGA
CCTTCACCGACGCCGACCGCATCGTCAAGGAGGTCGCCGACGAGATGGGGTTTGGCGACACCTGGGTGCCGACCCCGGTT
GGAGTGTTCTTCGGCCCCGACGGCACCAAGACGCCCGGCAAGACCGTGCCCGATCCCTACTTCGGCGGTGCCGGGCCGGC
GCGCACCGGCTGCCTGGAATGCGGCTGCTGTATGACGGGCTGTCGCCACGGTGCCAAGAACACCCTGGTGAAAAACTACC
TTGGCCTCGCGGAATCAGCTGGCGCGCAAGTGATTCCGATGACCACGGTGAAGGGGTTTGAGCGGCGGTCCGACGGGTTG
TGGGAGGTCCGCACAGTGCGAACCGGCAGTTGGCTGCGCCGGGATCGGCGCACCTTCACCGCAACGCAGCTGGTGCTGGC
CGCGGGCACCTGGGGGACCCAGCATCTGCTGTTCAAGATGCGGGATAGGGGTCGGCTCCCTGGTCTCTCGAAGCGATTGG
GTGTCCTTACCCGCACCAACTCAGAATCGATCGTCGGGGCCGCCACCTTGAAGGTCAATCCGGACCTGGACCTGACCCAC
GGCGTGGCGATCACGTCGTCGATTCACCCGACGGCCGACACCCACATCGAACCCGTGCGCTACGGCAAAGGCTCCAACGC
GATGGGGCTGCTGCAGACCTTGATGACCGACGGCTCCGGTCCGCAGGGCACCGATGTGCCGCGCTGGAGGCAGTTGCTGC
AGACCGCCAGTCAGGATCCGCGCGGCACCATCCGGATGCTCAATCCCCGGCAATGGAGCGAGCGCACCGTGATCGCGCTG
GTCATGCAGCACCTGGACAACTCGATCACCACGTTCACCAAGCGCGGGAAGCTGGGTATCCGCTGGTACTCGAGCAAGCA
GGGACACGGCGAGCCGAACCCTACATGGATCCCGATCGGCAACCAGGTCACCCGTCGCATCGCCGCCAAAATCGACGGCG
TGGCCGGCGGCACCTGGGGTGAGCTGTTCAACATCCCGCTCACCGCGCACTTTCTCGGCGGCGCGGTGATCGGCGACGAC
CCCGAGCACGGCGTCATCGACCCCTATCACCGGGTCTATGGCTATCCGACGCTGTACGTGGTTGACGGTGCGGCGATCTC
GGCGAACCTGGGTGTCAACCCGTCGCTGTCCATCGCCGCTCAAGCCGAGCGGGCCGCCTCGCTGTGGCCGAACAAGGGCG
AAACCGACCGGCGGCCACCGCAGGGTGAGCCCTATCGTCGGCTGGCGCCGATCCAACCGGCGCACCCGGTGGTGCCTGCC
GACGCCCCGGGCGCGCTGCGGTGGTTGCCGATCGATCCGGTCAGCAACGCGGGCTGA

Upstream 100 bases:

>100_bases
GACCTCAAGGAGTTCCAGAAGGTCGGCCTGACCGTTGGGGGCTGACGCCACCTGAGAGACTGATTAACTGGCCCGATGTA
AAGGGGGTCATACTGCAGCG

Downstream 100 bases:

>100_bases
GGCATCAGGAAGCGTGCGGTCGTTGGATATGGTCACCGGACTGCGCCGGGTGAGGCGGTGACGAAGCCGACCTCACGGCA
TCCGCTCAACAATCGGTGGT

Product: cholesterol oxidase precursor choD

Products: NA

Alternate protein names: Glucose-Methanol-Choline Oxidoreductase; FAD Dependent Oxidoreductase; GMC Oxidoreductase; Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; Choline Dehydrogenase; Cholesterol Oxidase ChoD; Oxidase; Oxidoreductase Glucose-Methanol-Choline Family; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Gmc Oxidoreductase Family Protein; Ferredoxin Domain Gmc Oxidoreductase; Cholesterol Oxidase ChoD; GMC Family Oxidoreductase; Gluconate 2-Dehydrogenase; Cholesterol-O2 Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; GMC Oxidoreductase Family Protein; Cholesterol Oxidase Chod; GMC Oxidoreductase Family; Cholesterol Oxidase Chob

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MKPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFSDEEFAKTSWDLRKFLWAPRLGCYGIQRIHPLRNVMILAGA
GVGGGSLNYANTLYVPPEPFFADQQWSHITDWRGELMPHYQQAQRMLGVVQNPTFTDADRIVKEVADEMGFGDTWVPTPV
GVFFGPDGTKTPGKTVPDPYFGGAGPARTGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSDGL
WEVRTVRTGSWLRRDRRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPGLSKRLGVLTRTNSESIVGAATLKVNPDLDLTH
GVAITSSIHPTADTHIEPVRYGKGSNAMGLLQTLMTDGSGPQGTDVPRWRQLLQTASQDPRGTIRMLNPRQWSERTVIAL
VMQHLDNSITTFTKRGKLGIRWYSSKQGHGEPNPTWIPIGNQVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDD
PEHGVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGETDRRPPQGEPYRRLAPIQPAHPVVPA
DAPGALRWLPIDPVSNAG

Sequences:

>Translated_578_residues
MKPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFSDEEFAKTSWDLRKFLWAPRLGCYGIQRIHPLRNVMILAGA
GVGGGSLNYANTLYVPPEPFFADQQWSHITDWRGELMPHYQQAQRMLGVVQNPTFTDADRIVKEVADEMGFGDTWVPTPV
GVFFGPDGTKTPGKTVPDPYFGGAGPARTGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSDGL
WEVRTVRTGSWLRRDRRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPGLSKRLGVLTRTNSESIVGAATLKVNPDLDLTH
GVAITSSIHPTADTHIEPVRYGKGSNAMGLLQTLMTDGSGPQGTDVPRWRQLLQTASQDPRGTIRMLNPRQWSERTVIAL
VMQHLDNSITTFTKRGKLGIRWYSSKQGHGEPNPTWIPIGNQVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDD
PEHGVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGETDRRPPQGEPYRRLAPIQPAHPVVPA
DAPGALRWLPIDPVSNAG
>Mature_578_residues
MKPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFSDEEFAKTSWDLRKFLWAPRLGCYGIQRIHPLRNVMILAGA
GVGGGSLNYANTLYVPPEPFFADQQWSHITDWRGELMPHYQQAQRMLGVVQNPTFTDADRIVKEVADEMGFGDTWVPTPV
GVFFGPDGTKTPGKTVPDPYFGGAGPARTGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSDGL
WEVRTVRTGSWLRRDRRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPGLSKRLGVLTRTNSESIVGAATLKVNPDLDLTH
GVAITSSIHPTADTHIEPVRYGKGSNAMGLLQTLMTDGSGPQGTDVPRWRQLLQTASQDPRGTIRMLNPRQWSERTVIAL
VMQHLDNSITTFTKRGKLGIRWYSSKQGHGEPNPTWIPIGNQVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDD
PEHGVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGETDRRPPQGEPYRRLAPIQPAHPVVPA
DAPGALRWLPIDPVSNAG

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63025; Mature: 63025

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFSDEEFAKTSWDLRKFLWAPRL
CCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC
GCYGIQRIHPLRNVMILAGAGVGGGSLNYANTLYVPPEPFFADQQWSHITDWRGELMPHY
CHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCH
QQAQRMLGVVQNPTFTDADRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVPDPY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
FGGAGPARTGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSDGL
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHCCCCC
WEVRTVRTGSWLRRDRRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPGLSKRLGVLTRTN
EEEEEECCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCEEEECC
SESIVGAATLKVNPDLDLTHGVAITSSIHPTADTHIEPVRYGKGSNAMGLLQTLMTDGSG
CCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCC
PQGTDVPRWRQLLQTASQDPRGTIRMLNPRQWSERTVIALVMQHLDNSITTFTKRGKLGI
CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEE
RWYSSKQGHGEPNPTWIPIGNQVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDD
EEECCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHEECCEEEHHHCCEEECCC
PEHGVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGETDRRPP
CCCCCCCCHHHHHCCCEEEEECCCEEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCC
QGEPYRRLAPIQPAHPVVPADAPGALRWLPIDPVSNAG
CCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFSDEEFAKTSWDLRKFLWAPRL
CCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC
GCYGIQRIHPLRNVMILAGAGVGGGSLNYANTLYVPPEPFFADQQWSHITDWRGELMPHY
CHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCH
QQAQRMLGVVQNPTFTDADRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVPDPY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
FGGAGPARTGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSDGL
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHCCCCC
WEVRTVRTGSWLRRDRRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPGLSKRLGVLTRTN
EEEEEECCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCEEEECC
SESIVGAATLKVNPDLDLTHGVAITSSIHPTADTHIEPVRYGKGSNAMGLLQTLMTDGSG
CCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCC
PQGTDVPRWRQLLQTASQDPRGTIRMLNPRQWSERTVIALVMQHLDNSITTFTKRGKLGI
CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEE
RWYSSKQGHGEPNPTWIPIGNQVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDD
EEECCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHEECCEEEHHHCCEEECCC
PEHGVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGETDRRPP
CCCCCCCCHHHHHCCCEEEEECCCEEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCC
QGEPYRRLAPIQPAHPVVPADAPGALRWLPIDPVSNAG
CCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA