Click here to switch to the map view.

The map label for this gene is mtrA [H]

Identifier: 148824448

GI number: 148824448

Start: 3638441

End: 3639127

Strand: Reverse

Name: mtrA [H]

Synonym: TBFG_13275

Alternate gene names: 148824448

Gene position: 3639127-3638441 (Counterclockwise)

Preceding gene: 148824449

Following gene: 148824447

Centisome position: 82.25

GC content: 62.01

Gene sequence:

>687_bases
ATGGACACCATGAGGCAAAGGATTTTGGTCGTTGACGACGACGCTTCGTTGGCTGAGATGCTCACCATCGTGCTGCGGGG
GGAAGGCTTCGACACCGCGGTCATCGGCGACGGTACTCAGGCTCTGACCGCGGTGCGCGAGCTGCGCCCCGATCTGGTGT
TATTGGATTTGATGCTGCCCGGTATGAACGGCATCGACGTGTGCCGGGTGTTGCGCGCCGATTCCGGTGTTCCGATCGTG
ATGCTCACCGCAAAGACCGACACCGTGGATGTGGTGCTGGGTCTGGAGTCGGGCGCCGACGACTACATCATGAAGCCGTT
CAAGCCCAAGGAGCTGGTTGCGCGGGTGCGGGCGCGGCTGCGCCGCAACGACGACGAACCCGCCGAGATGCTGTCCATCG
CCGACGTAGAAATCGACGTACCGGCGCACAAGGTCACTCGCAACGGTGAGCAGATCTCGTTGACACCGCTGGAATTCGAC
CTGTTGGTCGCATTGGCGCGCAAGCCGCGCCAGGTGTTTACTCGTGATGTGCTGCTCGAACAGGTATGGGGTTACCGGCA
CCCAGCCGATACCAGGCTGGTGAACGTGCATGTCCAGCGTCTGCGGGCCAAGGTCGAAAAGGATCCCGAGAACCCGACTG
TGGTGCTGACCGTTCGAGGAGTGGGGTACAAGGCCGGACCTCCGTGA

Upstream 100 bases:

>100_bases
GACTTTGGCGCCTCCAGACGTGCCAAGTTGAGGGTATTTGCCCTAATCAAGCAAGAAACGCCCGTGTGGTGCGCCAGTTT
TGTCCCGATGTGGTGACACC

Downstream 100 bases:

>100_bases
TCCGCGCCGGCGACGATGCAGAGCGCAGCGATGCTAAGGAGCGGCGCCGATGATCTTCGGCTCGCGCCGACGCATTCGGG
GTCGCCGGGGTCGCTCTGGC

Product: two component system sensor transduction transcriptional regulatory protein mtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIV
MLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFD
LLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP

Sequences:

>Translated_228_residues
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIV
MLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFD
LLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
>Mature_228_residues
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIV
MLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFD
LLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP

Specific function: Member of the two-component regulatory system mtrA/mtrB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=40.7894736842105, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=41.7777777777778, Blast_Score=164, Evalue=4e-42,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=40, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=41.0714285714286, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=37.6146788990826, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=36.322869955157, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=35.6164383561644, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=38.0530973451327, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=32.15859030837, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=34.3891402714932, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=32.5688073394495, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=33.7719298245614, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=32.8767123287671, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=33.6206896551724, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=35.1851851851852, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=37.3983739837398, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790299, Length=110, Percent_Identity=33.6363636363636, Blast_Score=68, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322000, Length=108, Percent_Identity=31.4814814814815, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25280; Mature: 25280

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
CCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEHHCC
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
CCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
HCCCCCHHHHHEEECEEEECCHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHH
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
HHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDTMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLP
CCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEHHCC
GMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARL
CCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
RRNDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLE
HCCCCCHHHHHEEECEEEECCHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHH
QVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP
HHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]