| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is gpmA [H]
Identifier: 148824413
GI number: 148824413
Start: 3603336
End: 3604022
Strand: Direct
Name: gpmA [H]
Synonym: TBFG_13240
Alternate gene names: 148824413
Gene position: 3603336-3604022 (Clockwise)
Preceding gene: 148824411
Following gene: 148824414
Centisome position: 81.44
GC content: 64.77
Gene sequence:
>687_bases GTGTCATCCTGGCATGCTGCTCGCACAGTGGTTCGGGCGACAGGCCTAGGATGTCGTCGGGCACAATCTGTCGGTATGGG CGTGCGCAACCACCGATTGCTACTGCTCCGCCACGGCGAGACCGCTTGGTCGACGCTGGGCCGGCACACCGGCGGTACCG AGGTCGAGCTGACCGATACCGGGCGAACGCAGGCAGAGCTGGCTGGTCAGCTGCTGGGTGAACTCGAACTTGACGACCCG ATTGTCATCTGTAGCCCGCGTCGACGGACGTTGGATACTGCCAAGTTGGCCGGCCTGACGGTGAATGAGGTAACTGGGCT GCTCGCCGAATGGGATTACGGTTCCTATGAGGGCCTTACGACGCCGCAGATCCGGGAATCCGAACCCGATTGGCTGGTGT GGACGCACGGCTGCCCAGCTGGAGAAAGCGTCGCACAGGTAAACGATCGCGCTGACAGCGCCGTCGCGCTGGCCCTGGAG CACATGTCCTCACGCGACGTGTTGTTTGTCAGCCATGGCCACTTCTCCCGCGCGGTGATCACGCGCTGGGTCCAGCTACC GCTCGCCGAAGGCAGCCGTTTCGCGATGCCCACCGCCTCGATCGGGATCTGCGGGTTCGAGCACGGCGTGCGTCAGCTCG CCGTGCTCGGGTTGACCGGTCATCCGCAGCCGATCGCAGCCGGGTGA
Upstream 100 bases:
>100_bases CTAGCACCCGGGTATCAGTCATAGGCGCCGCTCTCCCCCGCAAGCGGCAGGGACCCCCACCTCATCGTGCTCTCCCTTCG TCGTCGCCCGCGCAGTCACA
Downstream 100 bases:
>100_bases GCGCACACGTGGCAACCTTGCACCCAGAACCACCGTTCGCACTGTGCGGACCAAGAGGCACCCTGATTGCCCGCGGGGTG CGGACACGATACTGCGACGT
Product: acid phosphatase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDP IVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLTTPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALE HMSSRDVLFVSHGHFSRAVITRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG
Sequences:
>Translated_228_residues MSSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDP IVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLTTPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALE HMSSRDVLFVSHGHFSRAVITRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG >Mature_227_residues SSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDPI VICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLTTPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALEH MSSRDVLFVSHGHFSRAVITRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322896, Length=184, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24589; Mature: 24458
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS01121 CASPASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDT CCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEECC GRTQAELAGQLLGELELDDPIVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLT CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCC TPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALEHMSSRDVLFVSHGHFSRAVI CCCCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHH TRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG HHHHHCCCCCCCEEECCCCCEEEECHHHHHHEEEEEECCCCCCCCCCC >Mature Secondary Structure SSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDT CCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEECC GRTQAELAGQLLGELELDDPIVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLT CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCC TPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALEHMSSRDVLFVSHGHFSRAVI CCCCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHH TRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG HHHHHCCCCCCCEEECCCCCEEEECHHHHHHEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA