| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148824370
Identifier: 148824370
GI number: 148824370
Start: 3557467
End: 3558423
Strand: Reverse
Name: 148824370
Synonym: TBFG_13197
Alternate gene names: NA
Gene position: 3558423-3557467 (Counterclockwise)
Preceding gene: 148824375
Following gene: 148824367
Centisome position: 80.43
GC content: 67.29
Gene sequence:
>957_bases ATGACGCACCGGGCGAGCGCGCTCATCAGCGCACAGGAGTGGTTCTCCGCTGGGGAGAGGGTGGGCTACGACGCTGAGCG GCCGGGCATCAACCCACGTTCGCCGCTGCGCGCGTTCATACGGCGCGCTGCTGGGACGGGGGTCACGCGAACGTTCCTGC CTGGCTGGCCGGATGGTTCCTACGGTTGGGCGAAGGTGGAAGCTTTCTTGAGCTCGCGATTCCACTTCCCCCGCATCTAC CTGGACTACATCGGCCACGGCGACTCCGACAAACCCCGGGATTACCCGTACTCGACCTTCGAGCGCGCGGATCTCGTCGA AGCCCTCTGGCACGCCGAGGGGATAGCGCAGACCGTCGTCGTTGCCTTCGACTACTCCTGCATCGTCAGCCTTGAGCTGC TGGCGCGGCGGATCGATCGCGAGCGGGCGGGAAACGATCAGCGGACCCGAATCACGGCTTGCCTGCTCGCCAACGGCGGC ATCTTTGCCGACGGCCACACCCACGCCTGGTATACGACGCCGCTGCTCACATCGCCGCTCGGCGCGGCGATCACGCCGAT CGGCCAGCGCTCATGGCGCATGTTCGCCCCATTCTTGCGCCCCGTCTTCTCGCGCGGATACCCATTAAGCGCAGCGGAGA TGAAGGAGCTCCACGACGCGATCAGCCGGCGCGACGGCGTGCGCGTGCTGCCCGCCACGGCGGGCTTCGTGGACGAGCAT CGCGAGCACGCAGCGCGCTGGGACCTGGCGCGGATCATTTCGGCGCTGGGCGATGAGGTCGCCTTTGGTGTGGTGGGCAG CGCCGAGGATCCATTCGAGGGAGAGCAACTGCGGCTCGCCCGAGAGCGGCTTGCGGATTCGGTGGAAATCACCGAGCTTG CGGGCGGCCACCTGACGACAGCGGAGCAGCCCGATCGGCTCGCCGAGGTTATTGCGGCCCTGCCCGAGCGTTCCTAA
Upstream 100 bases:
>100_bases CATCGGTTAATGCGACACGTAAACTTATCGGTGTACTTTGGTTGCGGAGATGCACCGACATGGACCTCGACAACCTCCGC CAACGGCTAGCGAGCGCGCG
Downstream 100 bases:
>100_bases AGAGGGGGAACGCGGAAGCCGCCTAGGACTTCGGTGAGCAGGGCGGCGAACTCTACGGTGGTGCGGTCTCCGCCCGCGGG CCCCATCGCCTGGATGCCGA
Product: epoxide hydrolase mesT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTHRASALISAQEWFSAGERVGYDAERPGINPRSPLRAFIRRAAGTGVTRTFLPGWPDGSYGWAKVEAFLSSRFHFPRIY LDYIGHGDSDKPRDYPYSTFERADLVEALWHAEGIAQTVVVAFDYSCIVSLELLARRIDRERAGNDQRTRITACLLANGG IFADGHTHAWYTTPLLTSPLGAAITPIGQRSWRMFAPFLRPVFSRGYPLSAAEMKELHDAISRRDGVRVLPATAGFVDEH REHAARWDLARIISALGDEVAFGVVGSAEDPFEGEQLRLARERLADSVEITELAGGHLTTAEQPDRLAEVIAALPERS
Sequences:
>Translated_318_residues MTHRASALISAQEWFSAGERVGYDAERPGINPRSPLRAFIRRAAGTGVTRTFLPGWPDGSYGWAKVEAFLSSRFHFPRIY LDYIGHGDSDKPRDYPYSTFERADLVEALWHAEGIAQTVVVAFDYSCIVSLELLARRIDRERAGNDQRTRITACLLANGG IFADGHTHAWYTTPLLTSPLGAAITPIGQRSWRMFAPFLRPVFSRGYPLSAAEMKELHDAISRRDGVRVLPATAGFVDEH REHAARWDLARIISALGDEVAFGVVGSAEDPFEGEQLRLARERLADSVEITELAGGHLTTAEQPDRLAEVIAALPERS >Mature_317_residues THRASALISAQEWFSAGERVGYDAERPGINPRSPLRAFIRRAAGTGVTRTFLPGWPDGSYGWAKVEAFLSSRFHFPRIYL DYIGHGDSDKPRDYPYSTFERADLVEALWHAEGIAQTVVVAFDYSCIVSLELLARRIDRERAGNDQRTRITACLLANGGI FADGHTHAWYTTPLLTSPLGAAITPIGQRSWRMFAPFLRPVFSRGYPLSAAEMKELHDAISRRDGVRVLPATAGFVDEHR EHAARWDLARIISALGDEVAFGVVGSAEDPFEGEQLRLARERLADSVEITELAGGHLTTAEQPDRLAEVIAALPERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI29294637, Length=306, Percent_Identity=30.3921568627451, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI29294635, Length=306, Percent_Identity=30.3921568627451, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI29294639, Length=306, Percent_Identity=30.3921568627451, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 35230; Mature: 35099
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRASALISAQEWFSAGERVGYDAERPGINPRSPLRAFIRRAAGTGVTRTFLPGWPDGS CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC YGWAKVEAFLSSRFHFPRIYLDYIGHGDSDKPRDYPYSTFERADLVEALWHAEGIAQTVV CHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAFDYSCIVSLELLARRIDRERAGNDQRTRITACLLANGGIFADGHTHAWYTTPLLTSPL HHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCEEECCCCCCEEECCHHHCCC GAAITPIGQRSWRMFAPFLRPVFSRGYPLSAAEMKELHDAISRRDGVRVLPATAGFVDEH CHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH REHAARWDLARIISALGDEVAFGVVGSAEDPFEGEQLRLARERLADSVEITELAGGHLTT HHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC AEQPDRLAEVIAALPERS CCCHHHHHHHHHHCCCCC >Mature Secondary Structure THRASALISAQEWFSAGERVGYDAERPGINPRSPLRAFIRRAAGTGVTRTFLPGWPDGS CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC YGWAKVEAFLSSRFHFPRIYLDYIGHGDSDKPRDYPYSTFERADLVEALWHAEGIAQTVV CHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAFDYSCIVSLELLARRIDRERAGNDQRTRITACLLANGGIFADGHTHAWYTTPLLTSPL HHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCEEECCCCCCEEECCHHHCCC GAAITPIGQRSWRMFAPFLRPVFSRGYPLSAAEMKELHDAISRRDGVRVLPATAGFVDEH CHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH REHAARWDLARIISALGDEVAFGVVGSAEDPFEGEQLRLARERLADSVEITELAGGHLTT HHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC AEQPDRLAEVIAALPERS CCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]