| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824367
Identifier: 148824367
GI number: 148824367
Start: 3554566
End: 3555168
Strand: Reverse
Name: 148824367
Synonym: TBFG_13194
Alternate gene names: NA
Gene position: 3555168-3554566 (Counterclockwise)
Preceding gene: 148824370
Following gene: 148824366
Centisome position: 80.35
GC content: 66.83
Gene sequence:
>603_bases ATGCCGCCGGTCACCAGAACAACGGAACCCCCCAGGCGCGGGGGCCGCGGCGCTCGTCAGCGTATCTTGAAGGCGGCTGC AGAGCTGTTCTACTGCGAGGGCATCAACGCCACCGGGGTCGAACTGATTGCGAACAAGGCTTCGGTATCCAAGCGGACTC TCTACCAACACTTTCCGAGTAAGTCCGCGTTGGTGGAGGAGTACCTGCGCGGGCTCCGGCAAGCCGCCGGCGAGGCCGAC AAGATGCCCAAGGCATCCAACGCGACACCACGCGAGCGGCTGCTCGCATTGTTCGATCGTCCAAACAGGGGCGATGGGCG GATGCGAGGTTGTCCATTCCACAACGCGGCGGTCGAGGCGGCCGGGGAGATGCCCGGAGTCGAGCGGATCGTCCACTCGC ACAAACGCGACTACATCAAAGGCCTCGCCCGGCTGGCCCGAGAAGCCGGCGCAGCGCATCCGCGCAGCCTGGGCAATCAA CTCGCCGTGCTGTTCGAGGGCGCGGCCGCACTGTCCACCTCCCTCGACGATGCCGGCCCCTGGGCGCACGCCCGAGCGGC AGCGGAGGTCCTGATTGATCAGGCAACGGCCCGTCCGGTCTGA
Upstream 100 bases:
>100_bases GAAGTCATGAGACCTCCTACAGTAAACCGATTGGTGTACTTTGTGCTTTGACGGTACACGCGCTAAGGGGTGTTGTAAAC AGGTCGGTATACTCAGCACT
Downstream 100 bases:
>100_bases ACTCGTCATCGCAATGGATGGGGATTCGTCCACGCTCACGTTGTGAGATGGCCGGCGGCCAGGGTTTAGGATCGCCGAAT GTCCGTTGCGCTGCTTCGGG
Product: TetR/AcrR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulator TetR/AcrR-Family; Regulatory Protein Tetr; Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcription Regulator; Tetr Family Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein; Transcriptional Repressor
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPPVTRTTEPPRRGGRGARQRILKAAAELFYCEGINATGVELIANKASVSKRTLYQHFPSKSALVEEYLRGLRQAAGEAD KMPKASNATPRERLLALFDRPNRGDGRMRGCPFHNAAVEAAGEMPGVERIVHSHKRDYIKGLARLAREAGAAHPRSLGNQ LAVLFEGAAALSTSLDDAGPWAHARAAAEVLIDQATARPV
Sequences:
>Translated_200_residues MPPVTRTTEPPRRGGRGARQRILKAAAELFYCEGINATGVELIANKASVSKRTLYQHFPSKSALVEEYLRGLRQAAGEAD KMPKASNATPRERLLALFDRPNRGDGRMRGCPFHNAAVEAAGEMPGVERIVHSHKRDYIKGLARLAREAGAAHPRSLGNQ LAVLFEGAAALSTSLDDAGPWAHARAAAEVLIDQATARPV >Mature_199_residues PPVTRTTEPPRRGGRGARQRILKAAAELFYCEGINATGVELIANKASVSKRTLYQHFPSKSALVEEYLRGLRQAAGEADK MPKASNATPRERLLALFDRPNRGDGRMRGCPFHNAAVEAAGEMPGVERIVHSHKRDYIKGLARLAREAGAAHPRSLGNQL AVLFEGAAALSTSLDDAGPWAHARAAAEVLIDQATARPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21567; Mature: 21436
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVTRTTEPPRRGGRGARQRILKAAAELFYCEGINATGVELIANKASVSKRTLYQHFPS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC KSALVEEYLRGLRQAAGEADKMPKASNATPRERLLALFDRPNRGDGRMRGCPFHNAAVEA HHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH AGEMPGVERIVHSHKRDYIKGLARLAREAGAAHPRSLGNQLAVLFEGAAALSTSLDDAGP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC WAHARAAAEVLIDQATARPV HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPVTRTTEPPRRGGRGARQRILKAAAELFYCEGINATGVELIANKASVSKRTLYQHFPS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC KSALVEEYLRGLRQAAGEADKMPKASNATPRERLLALFDRPNRGDGRMRGCPFHNAAVEA HHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH AGEMPGVERIVHSHKRDYIKGLARLAREAGAAHPRSLGNQLAVLFEGAAALSTSLDDAGP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC WAHARAAAEVLIDQATARPV HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA