Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 148824255

GI number: 148824255

Start: 3439007

End: 3441283

Strand: Direct

Name: cstA [H]

Synonym: TBFG_13080

Alternate gene names: 148824255

Gene position: 3439007-3441283 (Clockwise)

Preceding gene: 148824254

Following gene: 148824257

Centisome position: 77.73

GC content: 64.38

Gene sequence:

>2277_bases
GTGGCAGCGCCGACCCCGTCGAATCGGATCGAAGAACGCTCCGGACACGCCAGCTGCGTCCGCGCCGATGCCGACCTGCC
ACCCGTGGCCATCCTCGGTCGCTCCCCCATCACGCTTCGGCACAAGATCTTCTTCGTGGCCGTTGCCGTGATCGGCGCTC
TCGCCTGGACCGTCGTCGCGTTCTTCCGCAACGAGCCGGTCAACGCGGTCTGGATCGTGGTCGCAGCGGGCTGCACCTAC
ATCATCGGGTTCCGGTTTTATGCGCGGCTGATCGAAATGAAAGTCGTCCGTCCCCGCGACGATCACGCCACCCCGGCCGA
AATCCTCGACGACGGCACCGACTACGTGCCCACCGACCGGCGGGTGGTATTCGGACACCACTTCGCCGCCATCGCCGGTG
CCGGGCCGCTTGTCGGACCAGTACTGGCCACCCAGATGGGTTACTTACCCAGCAGCATCTGGATTGTCGTCGGCGCGGTG
CTGGCCGGATGTGTCCAGGACTACCTGGTGTTGTGGATCTCCGTGCGGCGGCGTGGCCGCTCCCTGGGTCAGATGGTTCG
CGACGAACTCGGCGCCACCGCCGGAGTGGCCGCCCTCGTTGGAATCCCGGTCATTATCACCATTGTGATCGCGGTGCTGG
CGCTGGTGGTCGTGCGGGCCCTGGCCAAGAGCCCATGGGGCGTCTTCTCGATCGCCATGACCATCCCCATCGCCATCTTC
ATGGGCTGCTACTTGCGGTTCCTACGTCCCGGGCGGGTGTCGGAAGTTTCATTGATCGGGATCGGACTGCTGCTGCTCGC
CGTTGTCTCCGGTGATTGGGTTGCCCATACCTCCTGGGGCGCAGCGTGGTTCAGCTTGTCACCGGTGACACTGTGTTGGC
TTCTCATCAGCTATGGCTTCGCAGCTTCGGTGCTGCCGGTGTGGCTGCTGCTCGCGCCACGCGACTACCTGTCAACGTTC
ATGAAGGTCGGCACCATCGCGCTTCTCGCGATCGGTGTTTGTGCGGCTCACCCGATCATCGAGGCCCCAGCGGTGTCGAA
ATTCGCCGGTAGCGGCAACGGCCCGGTGTTCGCCGGCTCACTGTTTCCATTCCTGTTCATCACCATCGCGTGCGGGGCGC
TGTCTGGATTCCACGCGCTCATCTGCTCGGGCACGACGCCGAAGATGCTGGAGAAGGAAGGCCAGATGCGCGTGATCGGC
TACGGCGGCATGATGACCGAGTCCTTCGTCGCCGTCATAGCACTACTCACCGCGGCGATCCTCGACCAGCACCTATACTT
CACCCTCAACGCGCCGTCCCTGCATACCCACGACAGCGCAGCCACCGCCGCCAAGTACGTCAACGGGCTCGGTTTGACGG
GCTCACCGGTGACCCCAGACCACATCAGCCAGGCCGCCGCCAGCGTCGGCGAACAGACGATCGTGTCGCGCACCGGCGGT
GCGCCGACGCTGGCGTTCGGCATGGCGGAGATGCTGCATCGAGTGGTCGGCGGTGTGGGCCTCAAGGCGTTCTGGTATCA
CTTCGCGATCATGTTTGAGGCTCTGTTCATCCTCACCACCGTCGACGCCGGCACCAGGGCCGCGCGCTTCATGATCTCCG
ATGCGCTGGGCAACTTTGGCGGTGTGCTGCGCAAACTGCAGAATCCGAGCTGGCGTCCCGGTGCGTGGGCTTGCAGTTTG
GTGGTCGTCGCGGCGTGGGGCAGCATCCTGCTGCTCGGTGTGACCGATCCGCTGGGCGGCATCAACACGCTGTTCCCGCT
GTTCGGCATTGCCAACCAGTTGCTTGCCGGAATTGCGCTGACCGTCATCACCGTCGTCGTCATCAAGAAGGGGCGACTGA
AGTGGGCTTGGATACCGGGTATTCCACTGCTGTGGGATCTGGCGGTCACCCTGACCGCATCGTGGCAGAAGATCTTCTCC
GCTGATCCTTCTGTCGGCTACTGGACTCAGCATGCTCACGACGCGGCAGCCCAGCACGCAGGCGAGACCGCGTTCGGCTC
GGCCACCAACGCCGATGAGATCAACGACGTCGTCCGGAACACATTCGTCCAGGGCACCCTGTCGATCGTCTTCGTGGTGG
TCGTCGTGCTGGTTGTTGTCGCCGGAGTCATAGTGGCGCTGAAGACAATTCGCGGCCGCGGCATACCGTTGGCCGAGGAC
GATCCGGCGCCGTCGACGTTGTTCGCGCCCGCTGGCCTGATTCCTACAGCCGCAGAGCGAAAGTTGCAACGACGTTTGGG
CGCGCCGGCCTCGGCTTCCGTCGCGGCGCCCGACTAG

Upstream 100 bases:

>100_bases
CCGGCTGGGCGTCGCCAGATTCACGCTCGTCGACCAAGCGGGCGGGACAAGCAGCTGCAAGGATCAACGGAGATCGCACC
CGTGATTGAGGGAGGTGACG

Downstream 100 bases:

>100_bases
CCCTCCCGCTGCAGTGGTACCGGCGCCGCAATCAGACGGCGAGTAGGCGTGGGTCCAACCCGCGATTCGCGGCAGCCGGC
GGAGAGGGCGACCAAGAGAC

Product: carbon starvation protein A cstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 758; Mature: 757

Protein sequence:

>758_residues
MAAPTPSNRIEERSGHASCVRADADLPPVAILGRSPITLRHKIFFVAVAVIGALAWTVVAFFRNEPVNAVWIVVAAGCTY
IIGFRFYARLIEMKVVRPRDDHATPAEILDDGTDYVPTDRRVVFGHHFAAIAGAGPLVGPVLATQMGYLPSSIWIVVGAV
LAGCVQDYLVLWISVRRRGRSLGQMVRDELGATAGVAALVGIPVIITIVIAVLALVVVRALAKSPWGVFSIAMTIPIAIF
MGCYLRFLRPGRVSEVSLIGIGLLLLAVVSGDWVAHTSWGAAWFSLSPVTLCWLLISYGFAASVLPVWLLLAPRDYLSTF
MKVGTIALLAIGVCAAHPIIEAPAVSKFAGSGNGPVFAGSLFPFLFITIACGALSGFHALICSGTTPKMLEKEGQMRVIG
YGGMMTESFVAVIALLTAAILDQHLYFTLNAPSLHTHDSAATAAKYVNGLGLTGSPVTPDHISQAAASVGEQTIVSRTGG
APTLAFGMAEMLHRVVGGVGLKAFWYHFAIMFEALFILTTVDAGTRAARFMISDALGNFGGVLRKLQNPSWRPGAWACSL
VVVAAWGSILLLGVTDPLGGINTLFPLFGIANQLLAGIALTVITVVVIKKGRLKWAWIPGIPLLWDLAVTLTASWQKIFS
ADPSVGYWTQHAHDAAAQHAGETAFGSATNADEINDVVRNTFVQGTLSIVFVVVVVLVVVAGVIVALKTIRGRGIPLAED
DPAPSTLFAPAGLIPTAAERKLQRRLGAPASASVAAPD

Sequences:

>Translated_758_residues
MAAPTPSNRIEERSGHASCVRADADLPPVAILGRSPITLRHKIFFVAVAVIGALAWTVVAFFRNEPVNAVWIVVAAGCTY
IIGFRFYARLIEMKVVRPRDDHATPAEILDDGTDYVPTDRRVVFGHHFAAIAGAGPLVGPVLATQMGYLPSSIWIVVGAV
LAGCVQDYLVLWISVRRRGRSLGQMVRDELGATAGVAALVGIPVIITIVIAVLALVVVRALAKSPWGVFSIAMTIPIAIF
MGCYLRFLRPGRVSEVSLIGIGLLLLAVVSGDWVAHTSWGAAWFSLSPVTLCWLLISYGFAASVLPVWLLLAPRDYLSTF
MKVGTIALLAIGVCAAHPIIEAPAVSKFAGSGNGPVFAGSLFPFLFITIACGALSGFHALICSGTTPKMLEKEGQMRVIG
YGGMMTESFVAVIALLTAAILDQHLYFTLNAPSLHTHDSAATAAKYVNGLGLTGSPVTPDHISQAAASVGEQTIVSRTGG
APTLAFGMAEMLHRVVGGVGLKAFWYHFAIMFEALFILTTVDAGTRAARFMISDALGNFGGVLRKLQNPSWRPGAWACSL
VVVAAWGSILLLGVTDPLGGINTLFPLFGIANQLLAGIALTVITVVVIKKGRLKWAWIPGIPLLWDLAVTLTASWQKIFS
ADPSVGYWTQHAHDAAAQHAGETAFGSATNADEINDVVRNTFVQGTLSIVFVVVVVLVVVAGVIVALKTIRGRGIPLAED
DPAPSTLFAPAGLIPTAAERKLQRRLGAPASASVAAPD
>Mature_757_residues
AAPTPSNRIEERSGHASCVRADADLPPVAILGRSPITLRHKIFFVAVAVIGALAWTVVAFFRNEPVNAVWIVVAAGCTYI
IGFRFYARLIEMKVVRPRDDHATPAEILDDGTDYVPTDRRVVFGHHFAAIAGAGPLVGPVLATQMGYLPSSIWIVVGAVL
AGCVQDYLVLWISVRRRGRSLGQMVRDELGATAGVAALVGIPVIITIVIAVLALVVVRALAKSPWGVFSIAMTIPIAIFM
GCYLRFLRPGRVSEVSLIGIGLLLLAVVSGDWVAHTSWGAAWFSLSPVTLCWLLISYGFAASVLPVWLLLAPRDYLSTFM
KVGTIALLAIGVCAAHPIIEAPAVSKFAGSGNGPVFAGSLFPFLFITIACGALSGFHALICSGTTPKMLEKEGQMRVIGY
GGMMTESFVAVIALLTAAILDQHLYFTLNAPSLHTHDSAATAAKYVNGLGLTGSPVTPDHISQAAASVGEQTIVSRTGGA
PTLAFGMAEMLHRVVGGVGLKAFWYHFAIMFEALFILTTVDAGTRAARFMISDALGNFGGVLRKLQNPSWRPGAWACSLV
VVAAWGSILLLGVTDPLGGINTLFPLFGIANQLLAGIALTVITVVVIKKGRLKWAWIPGIPLLWDLAVTLTASWQKIFSA
DPSVGYWTQHAHDAAAQHAGETAFGSATNADEINDVVRNTFVQGTLSIVFVVVVVLVVVAGVIVALKTIRGRGIPLAEDD
PAPSTLFAPAGLIPTAAERKLQRRLGAPASASVAAPD

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=706, Percent_Identity=51.5580736543909, Blast_Score=686, Evalue=0.0,
Organism=Escherichia coli, GI87082431, Length=693, Percent_Identity=47.041847041847, Blast_Score=601, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 80047; Mature: 79916

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPTPSNRIEERSGHASCVRADADLPPVAILGRSPITLRHKIFFVAVAVIGALAWTVVA
CCCCCCCCHHHHCCCCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FFRNEPVNAVWIVVAAGCTYIIGFRFYARLIEMKVVRPRDDHATPAEILDDGTDYVPTDR
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC
RVVFGHHFAAIAGAGPLVGPVLATQMGYLPSSIWIVVGAVLAGCVQDYLVLWISVRRRGR
EEEECCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGQMVRDELGATAGVAALVGIPVIITIVIAVLALVVVRALAKSPWGVFSIAMTIPIAIF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MGCYLRFLRPGRVSEVSLIGIGLLLLAVVSGDWVAHTSWGAAWFSLSPVTLCWLLISYGF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHEECCHHHHHHHHHHHHH
AASVLPVWLLLAPRDYLSTFMKVGTIALLAIGVCAAHPIIEAPAVSKFAGSGNGPVFAGS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEHH
LFPFLFITIACGALSGFHALICSGTTPKMLEKEGQMRVIGYGGMMTESFVAVIALLTAAI
HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
LDQHLYFTLNAPSLHTHDSAATAAKYVNGLGLTGSPVTPDHISQAAASVGEQTIVSRTGG
HCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC
APTLAFGMAEMLHRVVGGVGLKAFWYHFAIMFEALFILTTVDAGTRAARFMISDALGNFG
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GVLRKLQNPSWRPGAWACSLVVVAAWGSILLLGVTDPLGGINTLFPLFGIANQLLAGIAL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
TVITVVVIKKGRLKWAWIPGIPLLWDLAVTLTASWQKIFSADPSVGYWTQHAHDAAAQHA
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GETAFGSATNADEINDVVRNTFVQGTLSIVFVVVVVLVVVAGVIVALKTIRGRGIPLAED
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DPAPSTLFAPAGLIPTAAERKLQRRLGAPASASVAAPD
CCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AAPTPSNRIEERSGHASCVRADADLPPVAILGRSPITLRHKIFFVAVAVIGALAWTVVA
CCCCCCCHHHHCCCCCCEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FFRNEPVNAVWIVVAAGCTYIIGFRFYARLIEMKVVRPRDDHATPAEILDDGTDYVPTDR
HHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC
RVVFGHHFAAIAGAGPLVGPVLATQMGYLPSSIWIVVGAVLAGCVQDYLVLWISVRRRGR
EEEECCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGQMVRDELGATAGVAALVGIPVIITIVIAVLALVVVRALAKSPWGVFSIAMTIPIAIF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MGCYLRFLRPGRVSEVSLIGIGLLLLAVVSGDWVAHTSWGAAWFSLSPVTLCWLLISYGF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHEECCHHHHHHHHHHHHH
AASVLPVWLLLAPRDYLSTFMKVGTIALLAIGVCAAHPIIEAPAVSKFAGSGNGPVFAGS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEHH
LFPFLFITIACGALSGFHALICSGTTPKMLEKEGQMRVIGYGGMMTESFVAVIALLTAAI
HHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
LDQHLYFTLNAPSLHTHDSAATAAKYVNGLGLTGSPVTPDHISQAAASVGEQTIVSRTGG
HCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC
APTLAFGMAEMLHRVVGGVGLKAFWYHFAIMFEALFILTTVDAGTRAARFMISDALGNFG
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GVLRKLQNPSWRPGAWACSLVVVAAWGSILLLGVTDPLGGINTLFPLFGIANQLLAGIAL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
TVITVVVIKKGRLKWAWIPGIPLLWDLAVTLTASWQKIFSADPSVGYWTQHAHDAAAQHA
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GETAFGSATNADEINDVVRNTFVQGTLSIVFVVVVVLVVVAGVIVALKTIRGRGIPLAED
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DPAPSTLFAPAGLIPTAAERKLQRRLGAPASASVAAPD
CCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]