Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148824189

Identifier: 148824189

GI number: 148824189

Start: 3369296

End: 3370276

Strand: Direct

Name: 148824189

Synonym: TBFG_13014

Alternate gene names: NA

Gene position: 3369296-3370276 (Clockwise)

Preceding gene: 148824188

Following gene: 148824190

Centisome position: 76.15

GC content: 64.63

Gene sequence:

>981_bases
ATGGAGGGAACGCGCATGGCGGGCGCCAAACATGCTGGGAGAATCGTCGCGATCACCACCGCGGCGGCGGTGATACTGGC
GGCGTGCAGTTCGGGCTCCAAGGGTGGAGCGGGCAGCGGCCACGCCGGCAAAGCTCGTTCGGCGGTGACCACCACCGATG
CCGACTGGAAGCCGGTGGCCGACGCGCTGGGACGTAGCGGCAAGCTCGGAGACAACAACACCGCGTATCGGATCAACCTG
CCGCGCAATGACCTTCACATCACGTCCTACGGTGTGGACATCAAACCGGGGCTGTCGTTGGGCGGGTACGCGGCATTCGC
CCGATACGACAACAACGAAACGCTGCTGATGGGCGACCTCGTGATCACCGAGGAGGAGTTGCCCAAGGTCACCGATGCGT
TGCAGGCGCATGGTATCGCCCAGACCGCACTGCACAAGCATCTGCTGCAGCAAGACCCGCCGGTGTGGTGGACCCACATT
CACGGCATGGGTGATGCCGCCCGACTGGCCCAAGGACTCAAGGCGGCGTTGGATGCCACAACGATCGGCCCGCCTACCCC
ACCGCCGGCACGGCAACCACCGGTCGACATCGACGTCGCCGGCGTCGACCAGGCGTTGGGCCGCAAGGGAACCCAAGATG
GTGGGCTGTTGAAGTACAGCATCCCCCGCAAAGACACCATCATCGAGGACGGGCACGTGCTGCCCGCAGTGTCGCTGAAC
CTGACGACGGTGATCAATTTTCAGCCGGTGGGCCGCGGTCGCGCAGCGATCAACGGCGATTTCATCCTGATCGCCCCCGA
GGTTCAGGAGGTCATCCGGGCAATGCGTGCCGGCAACATCACGATCGTGGAACTGCACAACCATGGGCTGACCGAAGAGC
CCCGCCTGTTCTACATGCATTACTGGGCCGTCGACGACGCGGTCACCCTGGCGCGGGCGCTGCGCCCGGCGATGGATGCC
ACCAACCTGCAGTCGTCATAA

Upstream 100 bases:

>100_bases
GGCCGTGCCCGGATCGGTGCGATCGAGCTTCATCGTGGTTTCATAATCACCCGATAGACCATGGCTAACCGAACTGCCAT
CCACGCCGTGGATGCAACGG

Downstream 100 bases:

>100_bases
TCCCGATGCAACCGCATAAGGGCTGGTGTGGCTGATGCATCCTGATGGCGGTGCATGGTTTCCTGCTCGAACGGGTCAGC
GTGGTGCGCGACGAGGCGAC

Product: lipoprotein lppY

Products: NA

Alternate protein names: LppY/LpqO Family Protein; Lipoprotein Lpqo; LysM Domain-Containing Protein; LOW QUALITY PROTEIN Lipoprotein Lpqo; Lipoprotein

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINL
PRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHI
HGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN
LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA
TNLQSS

Sequences:

>Translated_326_residues
MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINL
PRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHI
HGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN
LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA
TNLQSS
>Mature_326_residues
MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINL
PRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHI
HGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN
LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA
TNLQSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34507; Mature: 34507

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVA
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH
DALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDL
HHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEE
VITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDAT
EECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCC
TIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN
CCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCEEEEEE
LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMH
EEEEEEEEECCCCCEEECCCEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEE
YWAVDDAVTLARALRPAMDATNLQSS
EEEHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVA
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH
DALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDL
HHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEE
VITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDAT
EECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCC
TIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN
CCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCEEEEEE
LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMH
EEEEEEEEECCCCCEEECCCEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEE
YWAVDDAVTLARALRPAMDATNLQSS
EEEHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA