| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824189
Identifier: 148824189
GI number: 148824189
Start: 3369296
End: 3370276
Strand: Direct
Name: 148824189
Synonym: TBFG_13014
Alternate gene names: NA
Gene position: 3369296-3370276 (Clockwise)
Preceding gene: 148824188
Following gene: 148824190
Centisome position: 76.15
GC content: 64.63
Gene sequence:
>981_bases ATGGAGGGAACGCGCATGGCGGGCGCCAAACATGCTGGGAGAATCGTCGCGATCACCACCGCGGCGGCGGTGATACTGGC GGCGTGCAGTTCGGGCTCCAAGGGTGGAGCGGGCAGCGGCCACGCCGGCAAAGCTCGTTCGGCGGTGACCACCACCGATG CCGACTGGAAGCCGGTGGCCGACGCGCTGGGACGTAGCGGCAAGCTCGGAGACAACAACACCGCGTATCGGATCAACCTG CCGCGCAATGACCTTCACATCACGTCCTACGGTGTGGACATCAAACCGGGGCTGTCGTTGGGCGGGTACGCGGCATTCGC CCGATACGACAACAACGAAACGCTGCTGATGGGCGACCTCGTGATCACCGAGGAGGAGTTGCCCAAGGTCACCGATGCGT TGCAGGCGCATGGTATCGCCCAGACCGCACTGCACAAGCATCTGCTGCAGCAAGACCCGCCGGTGTGGTGGACCCACATT CACGGCATGGGTGATGCCGCCCGACTGGCCCAAGGACTCAAGGCGGCGTTGGATGCCACAACGATCGGCCCGCCTACCCC ACCGCCGGCACGGCAACCACCGGTCGACATCGACGTCGCCGGCGTCGACCAGGCGTTGGGCCGCAAGGGAACCCAAGATG GTGGGCTGTTGAAGTACAGCATCCCCCGCAAAGACACCATCATCGAGGACGGGCACGTGCTGCCCGCAGTGTCGCTGAAC CTGACGACGGTGATCAATTTTCAGCCGGTGGGCCGCGGTCGCGCAGCGATCAACGGCGATTTCATCCTGATCGCCCCCGA GGTTCAGGAGGTCATCCGGGCAATGCGTGCCGGCAACATCACGATCGTGGAACTGCACAACCATGGGCTGACCGAAGAGC CCCGCCTGTTCTACATGCATTACTGGGCCGTCGACGACGCGGTCACCCTGGCGCGGGCGCTGCGCCCGGCGATGGATGCC ACCAACCTGCAGTCGTCATAA
Upstream 100 bases:
>100_bases GGCCGTGCCCGGATCGGTGCGATCGAGCTTCATCGTGGTTTCATAATCACCCGATAGACCATGGCTAACCGAACTGCCAT CCACGCCGTGGATGCAACGG
Downstream 100 bases:
>100_bases TCCCGATGCAACCGCATAAGGGCTGGTGTGGCTGATGCATCCTGATGGCGGTGCATGGTTTCCTGCTCGAACGGGTCAGC GTGGTGCGCGACGAGGCGAC
Product: lipoprotein lppY
Products: NA
Alternate protein names: LppY/LpqO Family Protein; Lipoprotein Lpqo; LysM Domain-Containing Protein; LOW QUALITY PROTEIN Lipoprotein Lpqo; Lipoprotein
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINL PRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHI HGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA TNLQSS
Sequences:
>Translated_326_residues MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINL PRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHI HGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA TNLQSS >Mature_326_residues MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVADALGRSGKLGDNNTAYRINL PRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDLVITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHI HGMGDAARLAQGLKAALDATTIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMHYWAVDDAVTLARALRPAMDA TNLQSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34507; Mature: 34507
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVA CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH DALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDL HHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEE VITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDAT EECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCC TIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN CCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCEEEEEE LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMH EEEEEEEEECCCCCEEECCCEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEE YWAVDDAVTLARALRPAMDATNLQSS EEEHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEGTRMAGAKHAGRIVAITTAAAVILAACSSGSKGGAGSGHAGKARSAVTTTDADWKPVA CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH DALGRSGKLGDNNTAYRINLPRNDLHITSYGVDIKPGLSLGGYAAFARYDNNETLLMGDL HHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEE VITEEELPKVTDALQAHGIAQTALHKHLLQQDPPVWWTHIHGMGDAARLAQGLKAALDAT EECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCC TIGPPTPPPARQPPVDIDVAGVDQALGRKGTQDGGLLKYSIPRKDTIIEDGHVLPAVSLN CCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEECCCCCCEECCCCCCEEEEEE LTTVINFQPVGRGRAAINGDFILIAPEVQEVIRAMRAGNITIVELHNHGLTEEPRLFYMH EEEEEEEEECCCCCEEECCCEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEE YWAVDDAVTLARALRPAMDATNLQSS EEEHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA