| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is pknE [H]
Identifier: 148824159
GI number: 148824159
Start: 3335182
End: 3335949
Strand: Reverse
Name: pknE [H]
Synonym: TBFG_12984
Alternate gene names: 148824159
Gene position: 3335949-3335182 (Counterclockwise)
Preceding gene: 148824160
Following gene: 148824158
Centisome position: 75.4
GC content: 63.28
Gene sequence:
>768_bases GTGGCCGACAAATCCAAACGCCCCCCGCGATTCGATCTGAAGTCCGCCGACGGCAGCTTCGGCCGGCTCGTCCAGATTGG TGGCACCACCATCGTCGTCGTTTTTGCCGTCGTCCTGGTCTTCTACATCGTGACGTCGCGCGACGACAAGAAGGACGGCG TCGCGGGCCCCGGCGATGCAGTACGGGTGACGTCGAGCAAGCTGGTCACCCAGCCCGGAACCAGCAACCCCAAGGCCGTG GTGTCCTTCTACGAGGATTTCCTGTGTCCGGCGTGCGGCATATTCGAGCGCGGTTTCGGGCCAACCGTGTCCAAGCTCGT GGACATCGGCGCTGTCGCGGCCGATTACACGATGGTGGCCATTCTCGATAGCGCCAGCAATCAACACTATTCGTCGCGAG CGGCTGCTGCGGCTTATTGCGTTGCCGACGAATCGATCGAGGCGTTCCGCCGCTTCCACGCCGCCTTGTTCAGCAAGGAC ATCCAGCCTGCCGAGCTCGGCAAGGATTTCCCCGACAACGCGCGGTTGATCGAACTTGCCCGCGAAGCCGGCGTCGTGGG CAAGGTGCCCGACTGCATCAACAGCGGCAAGTACATCGAAAAAGTCGACGGGCTGGCGGCGGCGGTCAACGTGCACGCGA CCCCGACGGTCCGGGTCAATGGCACAGAGTACGAGTGGTCGACGCCGGCGGCGCTGGTCGCCAAGATCAAAGAAATTGTG GGTGATGTGCCGGGCATTGACTCGGCCGCTGCTACCGCGACATCCTGA
Upstream 100 bases:
>100_bases TTGAGTCGAGGCTGGCTTGCCGCCGGTACGCTAGAGGCGCCGTCGCCTGACCGCGGCCGCGACAAGCCGACAAATCGAGC ACGTGAGGATCAGCGAAACT
Downstream 100 bases:
>100_bases CGATTGTGGTGGCAGCTCGACCTGCCGAGCGATCCGGCGACCCGGCTGCGGTGCGGGTGCCGGTGCCTAGCGCGTGGTGG GTGCTGATCGGCGGTGTGAT
Product: membrane or secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAV VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKD IQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV GDVPGIDSAAATATS
Sequences:
>Translated_255_residues MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAV VSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKD IQPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV GDVPGIDSAAATATS >Mature_254_residues ADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVV SFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDI QPAELGKDFPDNARLIELAREAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIVG DVPGIDSAAATATS
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 26862; Mature: 26730
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA CCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA EEEECCCEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEE ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHH REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV HHCCCCCCCHHHHCCCCHHHHHCCHHEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHH GDVPGIDSAAATATS CCCCCCCCCHHCCCC >Mature Secondary Structure ADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDA CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE VRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVA EEEECCCEEECCCCCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEE ILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHH REAGVVGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIV HHCCCCCCCHHHHCCCCHHHHHCCHHEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHH GDVPGIDSAAATATS CCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]