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The map label for this gene is yibD [C]

Identifier: 148824146

GI number: 148824146

Start: 3320943

End: 3321770

Strand: Direct

Name: yibD [C]

Synonym: TBFG_12971

Alternate gene names: 148824146

Gene position: 3320943-3321770 (Clockwise)

Preceding gene: 148824145

Following gene: 148824150

Centisome position: 75.06

GC content: 60.02

Gene sequence:

>828_bases
ATGGTGCAGACGAAACGATACGCCGGCTTGACCGCAGCTAACACAAAGAAAGTCGCCATGGCCGCACCAATGTTTTCGAT
CATCATCCCCACCTTGAACGTGGCTGCGGTATTGCCTGCCTGCCTCGACAGCATCGCCCGTCAGACCTGCGGTGACTTCG
AGCTGGTACTGGTCGACGGCGGCTCGACGGACGAAACCCTCGACATCGCCAACATTTTCGCCCCCAACCTCGGCGAGCGG
TTGATCATTCATCGCGACACCGACCAGGGCGTCTACGACGCCATGAACCGCGGCGTGGACCTGGCCACCGGAACGTGGTT
GCTCTTTCTGGGCGCGGACGACAGCCTGTACGAGGCTGACACCCTGGCGCGGGTGGCCGCCTTCATTGGCGAACACGAGC
CCAGCGATCTGGTATATGGCGACGTGATCATGCGCTCAACCAATTTCCGCTGGGGTGGCGCCTTCGACCTCGACCGTCTG
TTGTTCAAGCGCAACATCTGCCATCAGGCGATCTTCTACCGCCGCGGACTCTTCGGCACCATCGGTCCCTACAACCTCCG
CTACCGGGTCCTGGCCGACTGGGACTTCAATATTCGCTGCTTTTCCAACCCAGCGCTCGTCACCCGCTACATGCACGTGG
TCGTTGCAAGCTACAACGAATTCGGCGGGCTCAGCAATACGATCGTCGACAAGGAGTTTTTGAAGCGGCTGCCGATGTCC
ACGAGACTCGGCATAAGGCTGGTCATAGTTCTGGTGCGCAGGTGGCCAAAGGTGATCAGCAGGGCCATGGTAATGCGCAC
CGTCATTTCTTGGCGGCGCCGACGTTAG

Upstream 100 bases:

>100_bases
GACGGCATCTTTTTCCGCGAGGACGATTGATTGGAATCGCTTCGCGAGGCCCGGCACCAGACCGGGCACCAGAGGTCCGC
GCAGATCGCCTGGGTCGAAG

Downstream 100 bases:

>100_bases
CGCGATACCACCGCAACGTTGACTCGATGCCCTTGGGCGGCGTGATCTTGGGTGGCCAACCCGCCTCTTGCAAGACCGAC
ACGTCTAACAGCTTGCGTGG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MVQTKRYAGLTAANTKKVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCGDFELVLVDGGSTDETLDIANIFAPNLGER
LIIHRDTDQGVYDAMNRGVDLATGTWLLFLGADDSLYEADTLARVAAFIGEHEPSDLVYGDVIMRSTNFRWGGAFDLDRL
LFKRNICHQAIFYRRGLFGTIGPYNLRYRVLADWDFNIRCFSNPALVTRYMHVVVASYNEFGGLSNTIVDKEFLKRLPMS
TRLGIRLVIVLVRRWPKVISRAMVMRTVISWRRRR

Sequences:

>Translated_275_residues
MVQTKRYAGLTAANTKKVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCGDFELVLVDGGSTDETLDIANIFAPNLGER
LIIHRDTDQGVYDAMNRGVDLATGTWLLFLGADDSLYEADTLARVAAFIGEHEPSDLVYGDVIMRSTNFRWGGAFDLDRL
LFKRNICHQAIFYRRGLFGTIGPYNLRYRVLADWDFNIRCFSNPALVTRYMHVVVASYNEFGGLSNTIVDKEFLKRLPMS
TRLGIRLVIVLVRRWPKVISRAMVMRTVISWRRRR
>Mature_275_residues
MVQTKRYAGLTAANTKKVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCGDFELVLVDGGSTDETLDIANIFAPNLGER
LIIHRDTDQGVYDAMNRGVDLATGTWLLFLGADDSLYEADTLARVAAFIGEHEPSDLVYGDVIMRSTNFRWGGAFDLDRL
LFKRNICHQAIFYRRGLFGTIGPYNLRYRVLADWDFNIRCFSNPALVTRYMHVVVASYNEFGGLSNTIVDKEFLKRLPMS
TRLGIRLVIVLVRRWPKVISRAMVMRTVISWRRRR

Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=93, Percent_Identity=34.4086021505376, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 31047; Mature: 31047

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQTKRYAGLTAANTKKVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCGDFELVLVDG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GSTDETLDIANIFAPNLGERLIIHRDTDQGVYDAMNRGVDLATGTWLLFLGADDSLYEAD
CCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCEEECCEEEEEECCCCCHHHHH
TLARVAAFIGEHEPSDLVYGDVIMRSTNFRWGGAFDLDRLLFKRNICHQAIFYRRGLFGT
HHHHHHHHHCCCCCCCEEEEHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
IGPYNLRYRVLADWDFNIRCFSNPALVTRYMHVVVASYNEFGGLSNTIVDKEFLKRLPMS
CCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
TRLGIRLVIVLVRRWPKVISRAMVMRTVISWRRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVQTKRYAGLTAANTKKVAMAAPMFSIIIPTLNVAAVLPACLDSIARQTCGDFELVLVDG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GSTDETLDIANIFAPNLGERLIIHRDTDQGVYDAMNRGVDLATGTWLLFLGADDSLYEAD
CCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCEEECCEEEEEECCCCCHHHHH
TLARVAAFIGEHEPSDLVYGDVIMRSTNFRWGGAFDLDRLLFKRNICHQAIFYRRGLFGT
HHHHHHHHHCCCCCCCEEEEHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
IGPYNLRYRVLADWDFNIRCFSNPALVTRYMHVVVASYNEFGGLSNTIVDKEFLKRLPMS
CCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
TRLGIRLVIVLVRRWPKVISRAMVMRTVISWRRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]