| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148824138
Identifier: 148824138
GI number: 148824138
Start: 3311444
End: 3312043
Strand: Reverse
Name: 148824138
Synonym: TBFG_12963
Alternate gene names: NA
Gene position: 3312043-3311444 (Counterclockwise)
Preceding gene: 148824139
Following gene: 148824137
Centisome position: 74.86
GC content: 52.5
Gene sequence:
>600_bases ATGACCGAGTGTTTTCTATCTGATCAAGAGATCCGAAAGCTCAATCGTGACCTTCGAATACTGATAGCAGCTAATGGCAC CCTCACTAGGGTTCTCAACATTGTCGCTGACGATGAGGTGATCGTGCAAATCGTCAAGCAGCGGATTCACGATGTTTCAC CGAAGCTATCCGAATTCGAGCAGCTAGGGCAGGTGGGGGTCGGCCGTGTTCTGCAGCGGTACATCATACTTAAAGGTCGG AACTCGGAACACTTATTTGTAGCCGCGGAGTCGTTGATTGCGATTGATCGGTTGCCGGCTGCAATTATAACAAGGTTGAC GCAGACAAACGATCCTCTCGGCGAGGTTATGGCAGCCAGCCACATCGAGACCTTCAAGGAAGAGGCTAAAGTCTGGGTCG GAGATTTGCCAGGTTGGCTCGCGCTCCACGGGTATCAGAATTCCCGAAAGAGAGCCGTTGCCCGCCGTTATCGCGTTATT TCCGGAGGCCAGCCGATCATGGTGGTGACGGAGCACTTTCTACGAAGCGTATTTCGAGATGCTCCGCATGAAGAACCTGA TCGCTGGCAGTTTTCAAATGCCATCACTCTGGCGCGCTAG
Upstream 100 bases:
>100_bases GGTAAGGTTCGGCGTTCGGCCAGCGTTGAGCGTTACCTACATCACGAATTCAGCCGCCTAGATGCTATGGCATAACAGCG CATGTATGTGGGGGAAGAAT
Downstream 100 bases:
>100_bases GGCGGTCATCCAATAAATGCGGAATGGGAATCTAGCGGGGCTCCTGGCTGAGCAGGCATCGGAGGCGGGATGGTACGACC GGCCGGCCTTCTATGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: 4-HB synthase; p-hydroxybenzoic acid synthase
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILKGR NSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVI SGGQPIMVVTEHFLRSVFRDAPHEEPDRWQFSNAITLAR
Sequences:
>Translated_199_residues MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILKGR NSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVI SGGQPIMVVTEHFLRSVFRDAPHEEPDRWQFSNAITLAR >Mature_198_residues TECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFEQLGQVGVGRVLQRYIILKGRN SEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAASHIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVIS GGQPIMVVTEHFLRSVFRDAPHEEPDRWQFSNAITLAR
Specific function: Removes the pyruvyl group from chorismate to provide 4- hydroxybenzoate (4HB). Involved in the synthesis of glycosylated p-hydroxybenzoic acid methyl esters (p-HBADs) and phenolic glycolipids (PGL) that play important roles in the pathogenesis of mycobact
COG id: COG3161
COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate--pyruvate lyase type 2 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHBS_MYCBO (Q7TXK6)
Other databases:
- EMBL: BX248344 - RefSeq: NP_856618.1 - ProteinModelPortal: Q7TXK6 - SMR: Q7TXK6 - EnsemblBacteria: EBMYCT00000014359 - GeneID: 1092132 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2973c - GeneTree: EBGT00050000018489 - HOGENOM: HBG569014 - OMA: LETHRPI - ProtClustDB: CLSK792184 - BioCyc: MBOV233413:MB2973C-MONOMER - InterPro: IPR002800
Pfam domain/function: PF01947 DUF98
EC number: NA
Molecular weight: Translated: 22587; Mature: 22456
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE CCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD HHHHHHHHHHEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC APHEEPDRWQFSNAITLAR CCCCCCCCEECCCEEEECC >Mature Secondary Structure TECFLSDQEIRKLNRDLRILIAANGTLTRVLNIVADDEVIVQIVKQRIHDVSPKLSEFE CCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH QLGQVGVGRVLQRYIILKGRNSEHLFVAAESLIAIDRLPAAIITRLTQTNDPLGEVMAAS HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HIETFKEEAKVWVGDLPGWLALHGYQNSRKRAVARRYRVISGGQPIMVVTEHFLRSVFRD HHHHHHHHHHEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC APHEEPDRWQFSNAITLAR CCCCCCCCEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972