Click here to switch to the map view.

The map label for this gene is smf [C]

Identifier: 148824085

GI number: 148824085

Start: 3216794

End: 3217963

Strand: Reverse

Name: smf [C]

Synonym: TBFG_12910

Alternate gene names: 148824085

Gene position: 3217963-3216794 (Counterclockwise)

Preceding gene: 148824086

Following gene: 148824084

Centisome position: 72.73

GC content: 71.71

Gene sequence:

>1170_bases
ATGATCGATCCGACGGCGCGGGCGTGGGCCTATCTGTCCCGGGTGGCCGAACCGCCGTGCGCCCAGCTGGCCGCGCTGGT
GCGATGTGTGGGCCCCGTGGAGGCCGCCGACCGGGTGCGCCGCGGGCAGGTCGGTAACGAGCTGGCGCAGCACACCGGTG
CCCGACGCGAAATAGACCGGGCCGCAGACGATCTCGAGCTACTCATGCGCCGCGGTGGGCGTCTGATCACTCCCGACGAC
GACGAGTGGCCGGTGCTGGCGTTCGCCGCTTTCAGTGGCGCCGGAGCCCGGGCAAGGCCGTGCGGCCACTCGCCGCTGGT
GTTGTGGGCCCTGGGCCCCGCGCGCCTGGACGAAGTGGCACCACGTGCGGCCGCCGTCGTTGGAACCCGGGCTGCGACGG
CCTACGGCGAGCATGTCGCGGCCGATCTGGCCGCCGGGTTGGCAGAGCGCGACGTCGCGGTCGTCTCCGGTGGCGCCTAC
GGGATCGACGGTGCGGCTCACCGCGCGGCGCTGGATTCCGAGGGCATCACCGTGGCCGTACTGGCCGGCGGATTTGACAT
CCCGTATCCGGCGGGCCATTCGGCGTTGCTACATCGCATTGCCCAACATGGGGTGCTGTTCACCGAATACCCGCCCGGTG
TCCGTCCGGCCCGGCACCGGTTCCTAACCCGCAACCGGTTGGTGGCCGCGGTCGCGAGGGCGGCGGTAGTGGTGGAAGCG
GGCCTGCGCAGCGGCGCCGCCAACACCGCTGCCTGGGCGCGGGCATTGGGCCGGGTGGTGGCAGCGGTGCCCGGCCCGGT
GACATCCTCGGCATCGGCGGGCTGTCATACGCTGCTTCGCCATGGCGCGGAGTTGGTCACCCGGGCCGACGATATCGTCG
AGTTCGTCGGTCACATCGGTGAGTTGGCCGGTGATGAACCGCGGCCCGGCGCAGCGCTCGACGTGCTAAGCGAAGCCGAA
CGCCAAGTGTACGAGGCCCTGCCGGGCCGCGGCGCCGCTACCATTGATGAGATCGCTGTCGGCTCCGGGCTGCTGCCCGC
GCAGGTGCTAGGTCCGCTGGCAATCCTCGAGGTCGCCGGGTTGGCCGAGTGTCGCGACGGGCGGTGGCGAATATTGCGCG
CCGGTGCCGGTCAGGCCGCGGCCAAGGGTGCAGCGGCCCGGCTCGTATAG

Upstream 100 bases:

>100_bases
TGCGGGTGGCCTGGAGTTTGGCCGACTTGGCCGGTCGCACATCGCCAGGCATCGACGAGGTCGCCGCCGCCCTGAGCTTC
CGGCAAACCGGAGCACGACG

Downstream 100 bases:

>100_bases
TCGACGCGGGTCGGGTCTGGACAGGAGGACATGTGGCGGGTCGACCATTGCACGCCTTTGAGGTTGTCGCTACCCGACAC
CTCGCGCCGCACATGGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELLMRRGGRLITPDD
DEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAY
GIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA
GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEPRPGAALDVLSEAE
RQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV

Sequences:

>Translated_389_residues
MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELLMRRGGRLITPDD
DEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAY
GIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA
GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEPRPGAALDVLSEAE
RQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV
>Mature_389_residues
MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELLMRRGGRLITPDD
DEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAY
GIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA
GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEPRPGAALDVLSEAE
RQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994932, Length=171, Percent_Identity=42.6900584795322, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40100; Mature: 40100

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCHHHHHHH
AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA
HHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHC
PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHCCCCCCEEEE
LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA
EECCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAECRDGRWRILRAGAGQAAAKGAAARLV
HHHCCCCCEEEEECCCCHHHHCCCHHCCC
>Mature Secondary Structure
MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDR
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCHHHHHHH
AADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVA
HHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHC
PRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHCCCCCCEEEE
LAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEA
EECCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIG
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAG
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAECRDGRWRILRAGAGQAAAKGAAARLV
HHHCCCCCEEEEECCCCHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]