| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is cdsA
Identifier: 148824070
GI number: 148824070
Start: 3202230
End: 3203150
Strand: Reverse
Name: cdsA
Synonym: TBFG_12895
Alternate gene names: 148824070
Gene position: 3203150-3202230 (Counterclockwise)
Preceding gene: 148824071
Following gene: 148824069
Centisome position: 72.4
GC content: 64.28
Gene sequence:
>921_bases GTGACAACCAACGATGCCGGCACCGGAAACCCCGCCGAGCAGCCGGCGCGTGGTGCTAAACAGCAGCCGGCGACCGAAAC GTCCCGCGCCGGCCGTGATTTGCGCGCAGCGATCGTGGTGGGCCTTTCCATAGGCCTAGTCCTCATCGCGGTGCTGGTGT TCGTTCCGCGCGTTTGGGTTGCCATCGTGGCCGTCGCCACCTTGGTCGCTACCCATGAGGTGGTGCGGAGGTTGCGGGAA GCGGGCTATCTCATCCCGGTTATCCCGTTGCTGATTGGCGGGCAGGCCGCGGTGTGGCTGACCTGGCCGTTCGGCGCGGT CGGCGCATTGGCGGGCTTTGGTGGCATGGTCGTTGTCTGCATGATTTGGCGACTGTTCATGCAGGACAGCGTGACGCGCC CGACGACCGGCGGTGCACCGTCGCCGGGAAACTACTTGTCCGACGTCTCGGCCACGGTCTTCCTGGCCGTGTGGGTCCCA TTGTTCTGCTCTTTCGGCGCAATGCTGGTCTACCCGGAAAATGGCTCGGGATGGGTGTTCTGCATGATGATCGCGGTCAT CGCTTCCGATGTCGGCGGCTACGCCGTGGGGGTGTTGTTTGGCAAGCATCCGATGGTTCCGACGATCAGCCCGAAGAAGT CGTGGGAGGGCTTTGCCGGTTCGCTGGTGTGCGGGATCACCGCAACGATCATCACCGCGACTTTCCTGGTCGGCAAAACG CCGTGGATTGGTGCACTGCTCGGCGTGCTTTTCGTGCTCACCACCGCGCTGGGCGACCTGGTGGAGTCGCAGGTCAAACG TGACCTCGGCATCAAAGACATGGGCCGCCTGCTACCCGGCCACGGCGGTCTGATGGACCGGCTCGACGGCATACTGCCTT CCGCGGTGGCGGCCTGGATAGTCCTCACACTGCTGCCCTGA
Upstream 100 bases:
>100_bases GACAAGACCACGCACCAATACGTCACCCAAATTGATGAGCTGGTTAAACACAAAGAAGGCGAGCTGCTGGAGGTCTAGCG GCCGCTCAGCAACAAAATCC
Downstream 100 bases:
>100_bases CAACGGCGATACTGGACAGGTCATGGTCCCCGAGTTGATGTTCGATGAGCCGCGTCCGGGTCGGCCGCCGCGGCACCTGG CCGATCTCGACGCGGCGGGC
Product: integral membrane phosphatidate cytidylyltransferase cdsA
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTTNDAGTGNPAEQPARGAKQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWVAIVAVATLVATHEVVRRLRE AGYLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVCMIWRLFMQDSVTRPTTGGAPSPGNYLSDVSATVFLAVWVP LFCSFGAMLVYPENGSGWVFCMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSLVCGITATIITATFLVGKT PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGILPSAVAAWIVLTLLP
Sequences:
>Translated_306_residues MTTNDAGTGNPAEQPARGAKQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWVAIVAVATLVATHEVVRRLRE AGYLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVCMIWRLFMQDSVTRPTTGGAPSPGNYLSDVSATVFLAVWVP LFCSFGAMLVYPENGSGWVFCMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSLVCGITATIITATFLVGKT PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGILPSAVAAWIVLTLLP >Mature_305_residues TTNDAGTGNPAEQPARGAKQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWVAIVAVATLVATHEVVRRLREA GYLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVCMIWRLFMQDSVTRPTTGGAPSPGNYLSDVSATVFLAVWVPL FCSFGAMLVYPENGSGWVFCMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSLVCGITATIITATFLVGKTP WIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGILPSAVAAWIVLTLLP
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family
Homologues:
Organism=Escherichia coli, GI87081696, Length=156, Percent_Identity=40.3846153846154, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787677, Length=108, Percent_Identity=37.962962962963, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CDSA_MYCBO (P63759)
Other databases:
- EMBL: BX248344 - RefSeq: NP_856550.1 - EnsemblBacteria: EBMYCT00000015167 - GeneID: 1092203 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2905c - GeneTree: EBGT00050000017496 - HOGENOM: HBG732679 - OMA: CALLWIT - ProtClustDB: CLSK792142 - BioCyc: MBOV233413:MB2905C-MONOMER - BRENDA: 2.7.7.41 - InterPro: IPR000374
Pfam domain/function: PF01148 CTP_transf_1
EC number: =2.7.7.41
Molecular weight: Translated: 32035; Mature: 31904
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1b1aa5bc)-; HASH(0x1c950824)-; HASH(0x13abae74)-; HASH(0x1cdc3260)-; HASH(0x1c83d334)-; HASH(0x1cdd32a4)-; HASH(0x1cdac4dc)-; HASH(0x1cdb4588)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNDAGTGNPAEQPARGAKQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWV CCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIVAVATLVATHEVVRRLREAGYLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVC HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH MIWRLFMQDSVTRPTTGGAPSPGNYLSDVSATVFLAVWVPLFCSFGAMLVYPENGSGWVF HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH CMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSLVCGITATIITATFLVGKT HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGILPSAVAAWI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VLTLLP HHHHCH >Mature Secondary Structure TTNDAGTGNPAEQPARGAKQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWV CCCCCCCCCCCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIVAVATLVATHEVVRRLREAGYLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVC HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH MIWRLFMQDSVTRPTTGGAPSPGNYLSDVSATVFLAVWVPLFCSFGAMLVYPENGSGWVF HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH CMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSLVCGITATIITATFLVGKT HHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGILPSAVAAWI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VLTLLP HHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972