Click here to switch to the map view.

The map label for this gene is yurM [H]

Identifier: 148824024

GI number: 148824024

Start: 3152125

End: 3152952

Strand: Reverse

Name: yurM [H]

Synonym: TBFG_12849

Alternate gene names: 148824024

Gene position: 3152952-3152125 (Counterclockwise)

Preceding gene: 148824025

Following gene: 148824023

Centisome position: 71.26

GC content: 62.32

Gene sequence:

>828_bases
GTGACGCCGGATCGGCTCCGTAGCAGCGTTGGCTACGCGGCCATGTTGCTGGTGGTCACGCTGATTGCCGGGCCGTTGCT
GTTCGTGTTCTTCACCTCGTTCAAGGATCAGCCCGACATCTATGCGCAGCCCACCAGTTGGTGGCCGCTGCGCTGGTACC
CGCAGAACTACCGCACGGCCACCGAGCAGATTCCGTTCTGGACGTTTCTGCGCAACTCGCTGATCATCACGTCGGTGCTG
GCGGTGGTGAAGTTCACGCTCGGTGTGCTCAGCGCCTTTGGCTTGGTGTTTGTCCGGTTCCCGGGCCGCACGGCGGTGTT
TTTGGTGATCATCGCCGCGTTGATGGTGCCCAACCAGATCACCGTGATTTCCAACTACGCGCTGATCTCACACCTGGGCC
TGCGCAACACCTTTGCCGGCATCATCCTGCCTCTGGCGGGGGTGGCGTTTGGAACCTTCTTGATGCGCAACCACTTTCTG
TCGCTGCCCGCCGAGATCATCGAGGCGGCCCGGATGGACGGCGCGCGGTGGTGGCAACTGCTGCTGCGGGTGGTGTTGCC
GATGTCGCGGCCCACCATGGTCGCCGTCGGTGTCATCACCGTGGTCAACGAATGGAACGAATACCTGTGGCCGTTCCTGA
TGTCCGACGACGAATCGGTGGCACCACTGCCGATAGGTCTGACGTTTCTGCAGCAGGCCGAGGGTGTGACGAACTGGGGC
CCGGTGATGGCGGTGACGCTGTTGGCGATGCTGCCGATCTTGCTGGTCTTCATCGCCTTGCAGCGGCAGATGATAAAGGG
CCTCACCTCGGGCGCGGTCAAGGGATAG

Upstream 100 bases:

>100_bases
TCCGGGCCGGTTATGGCGCCACGGTGGCCACGATCATGTTCCTGGTGCTGCTGGCCGTGACGTACTACCAGGTGCGGGTG
ATGGATCGGGGGCAGCGGCA

Downstream 100 bases:

>100_bases
GCATGGACCCGCTGAACCGCCGACAATTCCTCGCGCTGGCCGCTGCCGCCGCCGGCGTGACCGCCGGCTGCGCCGGGATG
GGCGGCGGCGGTTCGGTGAA

Product: sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTPDRLRSSVGYAAMLLVVTLIAGPLLFVFFTSFKDQPDIYAQPTSWWPLRWYPQNYRTATEQIPFWTFLRNSLIITSVL
AVVKFTLGVLSAFGLVFVRFPGRTAVFLVIIAALMVPNQITVISNYALISHLGLRNTFAGIILPLAGVAFGTFLMRNHFL
SLPAEIIEAARMDGARWWQLLLRVVLPMSRPTMVAVGVITVVNEWNEYLWPFLMSDDESVAPLPIGLTFLQQAEGVTNWG
PVMAVTLLAMLPILLVFIALQRQMIKGLTSGAVKG

Sequences:

>Translated_275_residues
MTPDRLRSSVGYAAMLLVVTLIAGPLLFVFFTSFKDQPDIYAQPTSWWPLRWYPQNYRTATEQIPFWTFLRNSLIITSVL
AVVKFTLGVLSAFGLVFVRFPGRTAVFLVIIAALMVPNQITVISNYALISHLGLRNTFAGIILPLAGVAFGTFLMRNHFL
SLPAEIIEAARMDGARWWQLLLRVVLPMSRPTMVAVGVITVVNEWNEYLWPFLMSDDESVAPLPIGLTFLQQAEGVTNWG
PVMAVTLLAMLPILLVFIALQRQMIKGLTSGAVKG
>Mature_274_residues
TPDRLRSSVGYAAMLLVVTLIAGPLLFVFFTSFKDQPDIYAQPTSWWPLRWYPQNYRTATEQIPFWTFLRNSLIITSVLA
VVKFTLGVLSAFGLVFVRFPGRTAVFLVIIAALMVPNQITVISNYALISHLGLRNTFAGIILPLAGVAFGTFLMRNHFLS
LPAEIIEAARMDGARWWQLLLRVVLPMSRPTMVAVGVITVVNEWNEYLWPFLMSDDESVAPLPIGLTFLQQAEGVTNWGP
VMAVTLLAMLPILLVFIALQRQMIKGLTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=268, Percent_Identity=32.089552238806, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=29.5373665480427, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790464, Length=220, Percent_Identity=29.5454545454545, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30616; Mature: 30485

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPDRLRSSVGYAAMLLVVTLIAGPLLFVFFTSFKDQPDIYAQPTSWWPLRWYPQNYRTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCHHHH
TEQIPFWTFLRNSLIITSVLAVVKFTLGVLSAFGLVFVRFPGRTAVFLVIIAALMVPNQI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCE
TVISNYALISHLGLRNTFAGIILPLAGVAFGTFLMRNHFLSLPAEIIEAARMDGARWWQL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
LLRVVLPMSRPTMVAVGVITVVNEWNEYLWPFLMSDDESVAPLPIGLTFLQQAEGVTNWG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCH
PVMAVTLLAMLPILLVFIALQRQMIKGLTSGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]