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The map label for this gene is ugpB [H]

Identifier: 148824023

GI number: 148824023

Start: 3150812

End: 3152122

Strand: Reverse

Name: ugpB [H]

Synonym: TBFG_12848

Alternate gene names: 148824023

Gene position: 3152122-3150812 (Counterclockwise)

Preceding gene: 148824024

Following gene: 148824022

Centisome position: 71.24

GC content: 64.53

Gene sequence:

>1311_bases
ATGGACCCGCTGAACCGCCGACAATTCCTCGCGCTGGCCGCTGCCGCCGCCGGCGTGACCGCCGGCTGCGCCGGGATGGG
CGGCGGCGGTTCGGTGAAGTCCGGTTCCGGCCCAATCGACTTCTGGTCCAGTCATCCCGGCCAATCCAGCGCGGCGGAAC
GGGAGCTGATCGGTCGTTTCCAGGACCGATTCCCCACTCTGTCGGTCAAGCTGATCGACGCCGGCAAGGACTACGACGAG
GTGGCACAGAAATTCAATGCGGCGCTCATCGGAACCGACGTGCCCGACGTCGTTTTGCTCGACGACCGATGGTGGTTCCA
TTTCGCCCTCAGCGGTGTTCTCACTGCCCTTGACGACCTGTTCGGCCAAGTTGGGGTGGACACAACGGATTACGTCGATT
CGCTGCTGGCCGACTATGAGTTCAACGGCCGCCATTACGCTGTGCCGTATGCTCGCTCGACGCCGCTGTTCTACTACAAC
AAGGCGGCGTGGCAACAGGCCGGCCTACCCGACCGCGGACCGCAATCCTGGTCAGAGTTCGACGAGTGGGGTCCGGAGTT
ACAGCGCGTGGTCGGCGCCGGTCGATCGGCGCACGGCTGGGCTAACGCCGACCTCATCTCGTGGACGTTTCAGGGACCGA
ACTGGGCATTCGGCGGTGCCTACTCCGACAAGTGGACATTGACATTGACCGAGCCCGCCACGATCGCGGCCGGCAACTTC
TATCGGAACTCCATCCATGGCAAGGGTTATGCGGCGGTCGCCAACGATATTGCCAACGAGTTCGCCACCGGAATCCTGGC
CTCGGCCGTGGCATCCACCGGCTCGCTGGCCGGCATCACCGCATCTGCCCGATTCGACTTCGGCGCCGCACCGCTGCCCA
CGGGCCCGGACGCAGCGCCCGCCTGTCCGACGGGCGGTGCGGGGCTGGCGATACCGGCCAAGCTCTCCGAGGAGCGAAAA
GTCAACGCGCTCAAGTTCATCGCATTCGTCACCAACCCGACGAACACCGCCTACTTCAGCCAGCAAACCGGCTATCTGCC
GGTGCGCAAGTCCGCCGTCGACGATGCCAGCGAACGGCACTATCTGGCGGACAATCCCCGTGCGCGGGTGGCGCTCGACC
AGCTGCCACACACCCGGACACAAGACTACGCACGGGTTTTCCTGCCCGGTGGTGACCGGATCATCTCCGCCGGCCTGGAA
TCCATCGGGCTGCGCGGAGCCGACGTGACCAAGACCTTCACGAACATCCAAAAACGGTTGCAGGTCATCCTGGATCGGCA
GATCATGCGGAAGCTGGCGGGGCATGGCTAA

Upstream 100 bases:

>100_bases
CGGTGACGCTGTTGGCGATGCTGCCGATCTTGCTGGTCTTCATCGCCTTGCAGCGGCAGATGATAAAGGGCCTCACCTCG
GGCGCGGTCAAGGGATAGGC

Downstream 100 bases:

>100_bases
CGTTCAGTACTCTGCTGTCACCCAGCGCTATCCCGGCGCCGACGCGCCGACCGTCGACAACTTGGACCTCGACATCGCCG
ACGGGGAGTTTCTGGTTCTG

Product: sn-glycerol-3-phosphate-binding lipoprotein ugpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDE
VAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYN
KAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF
YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERK
VNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLE
SIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG

Sequences:

>Translated_436_residues
MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDE
VAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYN
KAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF
YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERK
VNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLE
SIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG
>Mature_436_residues
MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRFQDRFPTLSVKLIDAGKDYDE
VAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDLFGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYN
KAAWQQAGLPDRGPQSWSEFDEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF
YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAPACPTGGAGLAIPAKLSEERK
VNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERHYLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLE
SIGLRGADVTKTFTNIQKRLQVILDRQIMRKLAGHG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=386, Percent_Identity=26.4248704663212, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46726; Mature: 46726

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL
HHCCCCEEEEEEECCCCHHHHHHHHCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHH
FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF
HHHCCCCHHHHHHHHHHCCEECCEEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHH
DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF
HHHCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEECCCCCCCEEEEEEECCCEEECCCH
YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC
ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH
CCCCCCCCEEECCCCCCCHHCCEEEEEEEEECCCCCEEECCCCCCCCCCHHHCCCCCCCC
YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL
EECCCCCCEEEHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QVILDRQIMRKLAGHG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDPLNRRQFLALAAAAAGVTAGCAGMGGGGSVKSGSGPIDFWSSHPGQSSAAERELIGRF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
QDRFPTLSVKLIDAGKDYDEVAQKFNAALIGTDVPDVVLLDDRWWFHFALSGVLTALDDL
HHCCCCEEEEEEECCCCHHHHHHHHCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHH
FGQVGVDTTDYVDSLLADYEFNGRHYAVPYARSTPLFYYNKAAWQQAGLPDRGPQSWSEF
HHHCCCCHHHHHHHHHHCCEECCEEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHH
DEWGPELQRVVGAGRSAHGWANADLISWTFQGPNWAFGGAYSDKWTLTLTEPATIAAGNF
HHHCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEECCCCCCCEEEEEEECCCEEECCCH
YRNSIHGKGYAAVANDIANEFATGILASAVASTGSLAGITASARFDFGAAPLPTGPDAAP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC
ACPTGGAGLAIPAKLSEERKVNALKFIAFVTNPTNTAYFSQQTGYLPVRKSAVDDASERH
CCCCCCCCEEECCCCCCCHHCCEEEEEEEEECCCCCEEECCCCCCCCCCHHHCCCCCCCC
YLADNPRARVALDQLPHTRTQDYARVFLPGGDRIISAGLESIGLRGADVTKTFTNIQKRL
EECCCCCCEEEHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QVILDRQIMRKLAGHG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]