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The map label for this gene is 148823943

Identifier: 148823943

GI number: 148823943

Start: 3080144

End: 3080419

Strand: Reverse

Name: 148823943

Synonym: TBFG_12768

Alternate gene names: NA

Gene position: 3080419-3080144 (Counterclockwise)

Preceding gene: 148823944

Following gene: 148823942

Centisome position: 69.62

GC content: 58.7

Gene sequence:

>276_bases
ATGAGTGATGGATGGAAAACCTTGCGGTTCGGGGAAGTCCTTGAGCTGCAGCGAGGACATGATCTTCCTGCGGCGTCGCG
GGGATCTGGAACGGTACCTGTTATCGGGTCATTCGGGGTGACCGGTATGCATGACACAGCTGCGTACGATGGTCCCGGTG
TAGCCATCGGCAGGAGCGGTGCGGCGATTGGTACCGCAACTTTCGTTGCGGGTCCGATCTGGCCGCTGGACACTTGCCTA
TTTGTTCGCGACTTCAAGGGCAACGATCCCCGTTAG

Upstream 100 bases:

>100_bases
TCGACGAGAAGATGGCCCGGTTGTCGAAGGCGTTGCTGGAGGCGTTCGATGAGTCGGCGCGGCTGGAAAGGGTCGTGCGG
GAGCAACTGGGGCGGCTTAG

Downstream 100 bases:

>100_bases
GTAGATCGGCTTCTTCAGGCAACAGATTTGGTGGGGTTCAACTCTGGGAGCCAGCGCCAACGCGGACGCTCGACGGGCGT
GGACCCTGCGGCACAACTTC

Product: type I restriction/modification system specificity determinant hsdS.1

Products: NA

Alternate protein names: Restriction System DNA Specificity Domain Protein; Type I Restriction- System S Subunit; Type I Restriction- System Specificity Subunit; Restriction System DNA Specificity Domain; Type I Restriction- System; Sty SBLI; Type I Restriction- System Specificity Subunit M

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSDGWKTLRFGEVLELQRGHDLPAASRGSGTVPVIGSFGVTGMHDTAAYDGPGVAIGRSGAAIGTATFVAGPIWPLDTCL
FVRDFKGNDPR

Sequences:

>Translated_91_residues
MSDGWKTLRFGEVLELQRGHDLPAASRGSGTVPVIGSFGVTGMHDTAAYDGPGVAIGRSGAAIGTATFVAGPIWPLDTCL
FVRDFKGNDPR
>Mature_90_residues
SDGWKTLRFGEVLELQRGHDLPAASRGSGTVPVIGSFGVTGMHDTAAYDGPGVAIGRSGAAIGTATFVAGPIWPLDTCLF
VRDFKGNDPR

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9476; Mature: 9345

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGWKTLRFGEVLELQRGHDLPAASRGSGTVPVIGSFGVTGMHDTAAYDGPGVAIGRSG
CCCCCCCEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCC
AAIGTATFVAGPIWPLDTCLFVRDFKGNDPR
CCCCCEEECCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
SDGWKTLRFGEVLELQRGHDLPAASRGSGTVPVIGSFGVTGMHDTAAYDGPGVAIGRSG
CCCCCCEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCC
AAIGTATFVAGPIWPLDTCLFVRDFKGNDPR
CCCCCEEECCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA