Click here to switch to the map view.

The map label for this gene is trkA [H]

Identifier: 148823881

GI number: 148823881

Start: 3021299

End: 3021982

Strand: Direct

Name: trkA [H]

Synonym: TBFG_12706

Alternate gene names: 148823881

Gene position: 3021299-3021982 (Clockwise)

Preceding gene: 148823875

Following gene: 148823882

Centisome position: 68.29

GC content: 65.64

Gene sequence:

>684_bases
ATGCGGGTGGTTGTGATGGGGTGCGGCCGGGTCGGGGCTTCGGTGGCCGACGGACTGTCCCGGATAGGCCATGAAGTCGC
GATCATCGACCGTGACAGCGCCGCCTTCAATCGGCTCAGCCCGCAGTTTGCCGGCGAGCGGGTGTTGGGTCAGGGCTTCG
ACCGAGATGTGCTGCTGCGTGCGGGCATCCAGGGGGCCGACGCATTCGCCGCGGTGTCCTCCGGCGACAACTCCAACATC
ATCTCGGCGCGGTTGGCCCGGGAAACCTTCGGTGTGCCGCGCGTCGTCGCGCGGATCTATGATGCCAAGCGCGCCGAGGT
CTATGAGCGACTCGGCATCCCCACCATTGCCACCGTTCCCTGGACCACCGATCGGCTGCTCAACGCGCTAATGCAGGACA
CCGAAACCGCCAAGTGGCGCGATCCTACCGGTACCGTCGCGGTCGCCGAGGTCGTCTTACACGAAGACTGGGTGGGCCAC
CGGGCGACCGATCTTGAGCAGGCCACCGGCGCTCGGATTGCGTTTCTGATCCGATTCGGAACCGGTGTATTGCCGGAACC
GAAGACGGTCCTACAGGCCGGCGATAAGGTCTATATCGCTGCGATATCCGGCCGGGCCGCAGAGGCAGCGGCCATCGCAG
CCTTGCCACCCAGTGAGGACTTCGAGTCGGGGGCTCGACGATGA

Upstream 100 bases:

>100_bases
TAGCGTTCCCTAGACGAGAATGTTCGCCGACGTAAATCGGCTGGCCACCGCGGGTTGCCGATCGCGTACGGCGCACCGGA
CACAGCCGAGAGGACCTCTA

Downstream 100 bases:

>100_bases
AAGTAGCTGTCGCCGGAGCGGGTGCGGTGGGCCGCTCGGTCACCCGCGAACTCGTGGAAAACGGACACGACATCACCCTG
ATCGAGCGCAACCCCGACCA

Product: trk system potassium uptake protein ceoB

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLRAGIQGADAFAAVSSGDNSNI
ISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGH
RATDLEQATGARIAFLIRFGTGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR

Sequences:

>Translated_227_residues
MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLRAGIQGADAFAAVSSGDNSNI
ISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGH
RATDLEQATGARIAFLIRFGTGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR
>Mature_227_residues
MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLRAGIQGADAFAAVSSGDNSNI
ISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGH
RATDLEQATGARIAFLIRFGTGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=215, Percent_Identity=22.7906976744186, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24210; Mature: 24210

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLR
CEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHHCCHHHHCCCCHHHHHH
AGIQGADAFAAVSSGDNSNIISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVP
CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECC
WTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGHRATDLEQATGARIAFLIRFG
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEC
TGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR
CCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLR
CEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHHCCHHHHCCCCHHHHHH
AGIQGADAFAAVSSGDNSNIISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVP
CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECC
WTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGHRATDLEQATGARIAFLIRFG
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEC
TGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR
CCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953; 2294088 [H]