| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823831
Identifier: 148823831
GI number: 148823831
Start: 2977722
End: 2978168
Strand: Direct
Name: 148823831
Synonym: TBFG_12656
Alternate gene names: NA
Gene position: 2977722-2978168 (Clockwise)
Preceding gene: 148823830
Following gene: 148823834
Centisome position: 67.3
GC content: 68.23
Gene sequence:
>447_bases ATGGGCCTGATCACTACAGAACCACGCTCTAGTCCCCACCCGCTCAGCCCACGGCTCGTCCACGAGCTAGGCGACCCACA CAGCACGCTGCGGGCAACCACTGACGGCAGCGGGGCAGCGTTGTTGATCCACGCGGGCGGCGAGATCGATGGCCGCAACG AGCATCTCTGGCGTCAATTGGTCACCGAGGCCGCCGCCGGCGTCACGGCGCCCGGACCGCTCATCGTCGACGTCACCGGG CTCGATTTCATGGGCTGCTGCGCTTTCGCCGCACTGGCCGACGAGGCACAACGATGTCGGTGCCGCGGCATCGACCTGCG TCTGGTGAGCCACCAGCCGATCGTCGCCCGGATCGCCGAAGCGGGTGGGCTGAGCCGAGTGCTGCCCATCTACCCGACCG TCGATACTGCGCTCGGCAAGGGCACGGCCGGTCCAGCCCGTTGCTGA
Upstream 100 bases:
>100_bases ATGTCATAAAAATGAGATCTGAAATTACTTGACAAGCTTGTCTTCGGACAGTGCGGGGCATCCGCCGCGGTGGCTGTACG CCGTCGATTAGGAGCGCACC
Downstream 100 bases:
>100_bases TCCCGGCCGTAAGAGCACCGAGCCGACCGCCGGTGGCCCCACCGCTAGGGCCGATCGCACCGCCGCGCGACGATGTTCGC GTCAGGCGCGCATGCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTG LDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALGKGTAGPARC
Sequences:
>Translated_148_residues MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTG LDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALGKGTAGPARC >Mature_147_residues GLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQLVTEAAAGVTAPGPLIVDVTGL DFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAEAGGLSRVLPIYPTVDTALGKGTAGPARC
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003658 - InterPro: IPR002645 [H]
Pfam domain/function: PF01740 STAS [H]
EC number: NA
Molecular weight: Translated: 15420; Mature: 15289
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL CCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEECCCCCCCEEEEEECCCCCCCHHHHHHHH VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH AGGLSRVLPIYPTVDTALGKGTAGPARC CCCCCCEEECCCCCHHHCCCCCCCCCCC >Mature Secondary Structure GLITTEPRSSPHPLSPRLVHELGDPHSTLRATTDGSGAALLIHAGGEIDGRNEHLWRQL CCCCCCCCCCCCCCCHHHHHHCCCCCHHEEECCCCCCCEEEEEECCCCCCCHHHHHHHH VTEAAAGVTAPGPLIVDVTGLDFMGCCAFAALADEAQRCRCRGIDLRLVSHQPIVARIAE HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH AGGLSRVLPIYPTVDTALGKGTAGPARC CCCCCCEEECCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]