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The map label for this gene is dedA [C]

Identifier: 148823830

GI number: 148823830

Start: 2976903

End: 2977559

Strand: Direct

Name: dedA [C]

Synonym: TBFG_12655

Alternate gene names: 148823830

Gene position: 2976903-2977559 (Clockwise)

Preceding gene: 148823829

Following gene: 148823831

Centisome position: 67.28

GC content: 67.43

Gene sequence:

>657_bases
ATGGATGTGGAGGCCCTGCTGCAGTCGATCCCGCCGCTCATGGTCTACCTGGTGGTCGGCGCGGTGGTAGGGATCGAGAG
CCTGGGCATCCCCCTTCCCGGCGAGATCGTGCTGGTCAGTGCCGCGGTGTTGTCGTCGCACCCCGAGCTGGCCGTCAACC
CGATCGGCGTCGGCGGCGCTGCGGTGATCGGCGCCGTGGTCGGCGATTCGATCGGCTACTCGATCGGCCGCCGCTTCGGC
TTACCGCTATTCGACCGGCTGGGCCGGAGGTTCCCAAAACACTTCGGCCCCGGTCATGTCGCGCTTGCTGAACGGTTGTT
CAACCGATGGGGAGTCCGAGCCGTGTTCCTCGGTCGCTTCATCGCGCTGCTGCGGATATTCGCCGGACCGCTCGCTGGCG
CCCTGAAGATGCCCTACCCGCGCTTCCTGGCCGCCAACATCACAGGCGGCATCTGCTGGGCCGGCGGCACCACTGCACTG
GTCTACTTCGCCGGGATGGCCGCCCAGCACTGGTTGGAACGGTTCTCCTGGATCGCGCTGGTCATCGCGGTCATCGCCGG
CATTACGGCCGCGATCTTGCTGCGCGAACGCACTTCGCGCGCGATCGCCGAACTCGAGGCCGAGCACTGCCGCAAAGCCG
GTACCACCGCGGCGTGA

Upstream 100 bases:

>100_bases
GCCGCGCGGGTCGTGCGGAACATTGCACCCGACGCGGCGGAATCGGAGTTGAGAAGTACATGGCGGGACGCACCCGGCAC
CGGTCAGGCATTCTTTACCC

Downstream 100 bases:

>100_bases
CCGACCGGCTTGAATCCGGTACCCACGCTCACAGGAGCTGCAATCTAGACAGATCTCCAGTCATGTCATAAAAATGAGAT
CTGAAATTACTTGACAAGCT

Product: transmembrane protein dedA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDVEALLQSIPPLMVYLVVGAVVGIESLGIPLPGEIVLVSAAVLSSHPELAVNPIGVGGAAVIGAVVGDSIGYSIGRRFG
LPLFDRLGRRFPKHFGPGHVALAERLFNRWGVRAVFLGRFIALLRIFAGPLAGALKMPYPRFLAANITGGICWAGGTTAL
VYFAGMAAQHWLERFSWIALVIAVIAGITAAILLRERTSRAIAELEAEHCRKAGTTAA

Sequences:

>Translated_218_residues
MDVEALLQSIPPLMVYLVVGAVVGIESLGIPLPGEIVLVSAAVLSSHPELAVNPIGVGGAAVIGAVVGDSIGYSIGRRFG
LPLFDRLGRRFPKHFGPGHVALAERLFNRWGVRAVFLGRFIALLRIFAGPLAGALKMPYPRFLAANITGGICWAGGTTAL
VYFAGMAAQHWLERFSWIALVIAVIAGITAAILLRERTSRAIAELEAEHCRKAGTTAA
>Mature_218_residues
MDVEALLQSIPPLMVYLVVGAVVGIESLGIPLPGEIVLVSAAVLSSHPELAVNPIGVGGAAVIGAVVGDSIGYSIGRRFG
LPLFDRLGRRFPKHFGPGHVALAERLFNRWGVRAVFLGRFIALLRIFAGPLAGALKMPYPRFLAANITGGICWAGGTTAL
VYFAGMAAQHWLERFSWIALVIAVIAGITAAILLRERTSRAIAELEAEHCRKAGTTAA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=137, Percent_Identity=32.8467153284672, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23018; Mature: 23018

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVEALLQSIPPLMVYLVVGAVVGIESLGIPLPGEIVLVSAAVLSSHPELAVNPIGVGGA
CCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCHH
AVIGAVVGDSIGYSIGRRFGLPLFDRLGRRFPKHFGPGHVALAERLFNRWGVRAVFLGRF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHH
IALLRIFAGPLAGALKMPYPRFLAANITGGICWAGGTTALVYFAGMAAQHWLERFSWIAL
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
VIAVIAGITAAILLRERTSRAIAELEAEHCRKAGTTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDVEALLQSIPPLMVYLVVGAVVGIESLGIPLPGEIVLVSAAVLSSHPELAVNPIGVGGA
CCHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCHH
AVIGAVVGDSIGYSIGRRFGLPLFDRLGRRFPKHFGPGHVALAERLFNRWGVRAVFLGRF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHH
IALLRIFAGPLAGALKMPYPRFLAANITGGICWAGGTTALVYFAGMAAQHWLERFSWIAL
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
VIAVIAGITAAILLRERTSRAIAELEAEHCRKAGTTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]