| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is pgsA1
Identifier: 148823806
GI number: 148823806
Start: 2953276
End: 2953929
Strand: Reverse
Name: pgsA1
Synonym: TBFG_12631
Alternate gene names: 148823806
Gene position: 2953929-2953276 (Counterclockwise)
Preceding gene: 148823807
Following gene: 148823805
Centisome position: 66.76
GC content: 67.58
Gene sequence:
>654_bases ATGAGCAAGCTGCCCTTCCTGTCCCGGGCGGCGTTCGCCCGGATTACCACCCCGATCGCCAGGGGACTGCTGCGGGTCGG CCTCACGCCGGACGTCGTCACCATCCTGGGCACCACCGCGTCGGTGGCGGGAGCGCTGACGCTGTTCCCGATGGGCAAGC TGTTCGCGGGTGCGTGTGTGGTGTGGTTCTTCGTGTTGTTCGACATGCTGGACGGGGCGATGGCCCGGGAGCGCGGGGGC GGCACTCGCTTCGGCGCGGTGCTGGACGCCACCTGTGACCGCATCAGTGACGGCGCGGTGTTCTGCGGTCTGCTGTGGTG GATAGCGTTTCACATGCGCGACCGACCGCTGGTGATCGCGACCTTGATCTGTCTGGTCACCTCGCAGGTGATCTCTTACA TCAAGGCCCGGGCGGAGGCCAGCGGGCTGCGCGGCGACGGCGGCTTCATCGAACGGCCGGAACGGTTGATCATCGTGCTG ACCGGCGCCGGGGTGTCGGACTTCCCGTTTGTGCCCTGGCCGCCGGCGTTGTCGGTGGGGATGTGGCTGCTGGCCGTCGC CAGCGTGATCACCTGCGTGCAGCGGTTGCACACGGTCTGGACTTCACCCGGAGCCATCGATCGGATGGCGATTCCTGGAA AGGGCGACCGGTGA
Upstream 100 bases:
>100_bases GCGATGCGAATTTCATCACCATCATCGGGGGCTCCAAGGTGATTCCGCAGCTGCTGCGCGACACCCGTCGGCTGCTTGCC ACCGAGTGGGCTCGGCAACC
Downstream 100 bases:
>100_bases TTGCCGGCCTTAAGGGCTTGAAGCTGCCCAAAGATCCGCGCAGTTCCGTGACGCGCACCGCGACCGACTGGGCGTATGCG GCCGGCTGGATGGCCGTACG
Product: phosphatidylinositol synthase pgsA1
Products: NA
Alternate protein names: Phosphatidylinositol synthase; PI synthase
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSKLPFLSRAAFARITTPIARGLLRVGLTPDVVTILGTTASVAGALTLFPMGKLFAGACVVWFFVLFDMLDGAMARERGG GTRFGAVLDATCDRISDGAVFCGLLWWIAFHMRDRPLVIATLICLVTSQVISYIKARAEASGLRGDGGFIERPERLIIVL TGAGVSDFPFVPWPPALSVGMWLLAVASVITCVQRLHTVWTSPGAIDRMAIPGKGDR
Sequences:
>Translated_217_residues MSKLPFLSRAAFARITTPIARGLLRVGLTPDVVTILGTTASVAGALTLFPMGKLFAGACVVWFFVLFDMLDGAMARERGG GTRFGAVLDATCDRISDGAVFCGLLWWIAFHMRDRPLVIATLICLVTSQVISYIKARAEASGLRGDGGFIERPERLIIVL TGAGVSDFPFVPWPPALSVGMWLLAVASVITCVQRLHTVWTSPGAIDRMAIPGKGDR >Mature_216_residues SKLPFLSRAAFARITTPIARGLLRVGLTPDVVTILGTTASVAGALTLFPMGKLFAGACVVWFFVLFDMLDGAMARERGGG TRFGAVLDATCDRISDGAVFCGLLWWIAFHMRDRPLVIATLICLVTSQVISYIKARAEASGLRGDGGFIERPERLIIVLT GAGVSDFPFVPWPPALSVGMWLLAVASVITCVQRLHTVWTSPGAIDRMAIPGKGDR
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PISA_MYCTU (Q7D6W6)
Other databases:
- EMBL: AE000516 - EMBL: BX842580 - PIR: C70571 - RefSeq: NP_337189.1 - RefSeq: YP_177894.1 - EnsemblBacteria: EBMYCT00000002767 - EnsemblBacteria: EBMYCT00000069829 - GeneID: 888209 - GeneID: 925620 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2687 - KEGG: mtu:Rv2612c - TIGR: MT2687 - TubercuList: Rv2612c - GeneTree: EBGT00050000015462 - HOGENOM: HBG645896 - OMA: VIQRLAN - ProtClustDB: CLSK799355 - GO: GO:0040007 - InterPro: IPR000462
Pfam domain/function: PF01066 CDP-OH_P_transf
EC number: =2.7.8.11
Molecular weight: Translated: 23252; Mature: 23121
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c8bf9a8)-; HASH(0x1c4f6d80)-; HASH(0x1c854ce8)-; HASH(0x1c70885c)-;
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLPFLSRAAFARITTPIARGLLRVGLTPDVVTILGTTASVAGALTLFPMGKLFAGACV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VWFFVLFDMLDGAMARERGGGTRFGAVLDATCDRISDGAVFCGLLWWIAFHMRDRPLVIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH TLICLVTSQVISYIKARAEASGLRGDGGFIERPERLIIVLTGAGVSDFPFVPWPPALSVG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH MWLLAVASVITCVQRLHTVWTSPGAIDRMAIPGKGDR HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCH >Mature Secondary Structure SKLPFLSRAAFARITTPIARGLLRVGLTPDVVTILGTTASVAGALTLFPMGKLFAGACV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VWFFVLFDMLDGAMARERGGGTRFGAVLDATCDRISDGAVFCGLLWWIAFHMRDRPLVIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH TLICLVTSQVISYIKARAEASGLRGDGGFIERPERLIIVLTGAGVSDFPFVPWPPALSVG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH MWLLAVASVITCVQRLHTVWTSPGAIDRMAIPGKGDR HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036; 10889206