| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823766
Identifier: 148823766
GI number: 148823766
Start: 2908210
End: 2909277
Strand: Reverse
Name: 148823766
Synonym: TBFG_12591
Alternate gene names: NA
Gene position: 2909277-2908210 (Counterclockwise)
Preceding gene: 148823767
Following gene: 148823764
Centisome position: 65.75
GC content: 66.85
Gene sequence:
>1068_bases ATGAGCGCTTCGCTGCTAGTCAGGACGGCCTGCGGCGGCCGTGCGGTCGCCCAACGGTTGCGCACCGTGCTGTGGCCGAT CACCCAGACATCGGTCGTCGCCGGCCTCGCGTGGTATCTCACCCATGACGTGTTCAACCATCCGCAGGCGTTCTTCGCGC CGATTTCGGCTGTGGTGTGCATGTCGGCGACCAACGTGCTGCGCGCACGACGTGCCCAACAGATGATCGTCGGGGTGGCG CTGGGGATCGTGCTGGGTGCTGGCGTGCATGCTCTGCTTGGTTCCGGACCGATCGCCATGGGTGTGGTGGTGTTCATCGC GTTGTCGGTCGCGGTGCTGTGCGCACGCGGGTTGGTCGCGCAAGGCTTAATGTTCATCAACCAGGCCGCCGTCTCCGCGG TGCTGGTCTTGGTCTTCGCGTCCAACGGCAGTGTGGTTTTCGAACGCCTCTTCGACGCGCTGGTCGGTGGTGGGCTGGCT ATCGTGTTCAGCATTCTGCTCTTCCCGCCCGACCCGGTGGTCATGCTGTGCAGTGCGCGCGCCGACGTGTTGGCCGCTGT GCGCGACATCCTCGCCGAGCTGGTGAACACGGTGAGCGATCCCACCAGCGCCCCGCCCGACTGGCCGATGGCAGCCGCTG ATCGACTGCATCAGCAGCTGAACGGGCTCATCGAGGTGCGCGCCAACGCTGCCATGGTGGCGCGGCGAGCGCCCCGCCGA TGGGGGGTGCGCAGCACTGTCCGCGATCTCGATCAACAGGCCGTCTACCTGGCCCTGCTGGTCAGTTCGGTGTTGCATCT GGCTCGCACCATTGCCGGGCCTGGTGGCGATAAGCTGCCAACGCCCGTGCACGCCGTGCTCACCGACCTCGCCGCGGGAA CCGGCCTGGCCGACGCGGATCCGACGGCAGCGAACGAGCACGCGGCCGCCGCCCGCGCAACCGCGTCGACACTGCAATCG GCTGCTTGTGGCAGCAACGAAGTGGTGCGCGCCGATATCGTCCAAGCGTGTGTCACCGATCTACAACGGGTAATCGAACG CCCGGGCCCGTCGGGCATGTCAGCCTGA
Upstream 100 bases:
>100_bases AAGGAGTCCGGAATAGATGCCCAGCCCAAGCGGGTCCAGCAGGCATGACCAGATCTTTGCGGTTACGACGTCGCACCCGA GTGTGAATAAATAGGCGTTC
Downstream 100 bases:
>100_bases ATTGGCGAGAAACGCCTGCACCAGCTGCTTCGGCGCCTGCATCAGCCAGGCCTCGGTGATCAACTCCTCGAGGTCGCGAA CCTCGATCTCGGCCAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVCMSATNVLRARRAQQMIVGVA LGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLA IVFSILLFPPDPVVMLCSARADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARATASTLQS AACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA
Sequences:
>Translated_355_residues MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVCMSATNVLRARRAQQMIVGVA LGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLA IVFSILLFPPDPVVMLCSARADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARATASTLQS AACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA >Mature_354_residues SASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVCMSATNVLRARRAQQMIVGVAL GIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLAI VFSILLFPPDPVVMLCSARADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRRW GVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARATASTLQSA ACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA
Specific function: Unknown
COG id: COG4129
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2571_MYCTU (P65015)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: B70724 - RefSeq: NP_217087.1 - RefSeq: NP_337146.1 - EnsemblBacteria: EBMYCT00000001568 - EnsemblBacteria: EBMYCT00000072747 - GeneID: 887382 - GeneID: 925660 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2647 - KEGG: mtu:Rv2571c - TIGR: MT2647 - TubercuList: Rv2571c - GeneTree: EBGT00050000018109 - HOGENOM: HBG569187 - OMA: DHPQPFF - ProtClustDB: CLSK791930 - InterPro: IPR010343
Pfam domain/function: PF06081 DUF939
EC number: NA
Molecular weight: Translated: 36790; Mature: 36659
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c5f8ca0)-; HASH(0x1c5dfb54)-; HASH(0x1c0eea0c)-; HASH(0x1c644b10)-; HASH(0x1c754770)-; HASH(0x1c2ddf8c)-; HASH(0x1b7a654c)-;
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVC CCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MSATNVLRARRAQQMIVGVALGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLAIVFSILLFPPDPVVMLCSAR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH ADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PTAANEHAAAARATASTLQSAACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH >Mature Secondary Structure SASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVC CCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MSATNVLRARRAQQMIVGVALGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLAIVFSILLFPPDPVVMLCSAR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH ADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PTAANEHAAAARATASTLQSAACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036