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The map label for this gene is 148823752

Identifier: 148823752

GI number: 148823752

Start: 2889894

End: 2890283

Strand: Reverse

Name: 148823752

Synonym: TBFG_12577

Alternate gene names: NA

Gene position: 2890283-2889894 (Counterclockwise)

Preceding gene: 148823755

Following gene: 148823751

Centisome position: 65.33

GC content: 66.41

Gene sequence:

>390_bases
GTGCTGGATGTGGACACCGCGCGTCGCCGCATTGTCGATCTCACCGACGCCGTGCGCGCCTTCTGCACCGCCCATGATGA
TGGCCTGTGCAACGTGTTCGTCCCGCACGCTACGGCCGGCGTTGCGATTATCGAGACCGGCGCCGGTTCCGACGAGGATC
TGGTGGACACGCTGGTGCGGTTGTTGCCGCGCGACGACCGCTACCGGCACGCGCACGGGTCCTACGGTCACGGCGCCGAC
CACTTGTTACCGGCTTTTGTTGCGCCGTCGGTGACGGTGCCGGTCTCGGGGGGCCAGCCCCTGCTGGGCACCTGGCAAAG
CATCGTTCTGGTCGACCTCAACCAGGACAATCCGCGGCGGTCGGTGCGATTGAGCTTTGTGGAAGGCTGA

Upstream 100 bases:

>100_bases
CCTTCCTCCGACGGGCCGGCCGGGGCAATGGGCAATCCGACGTCAATGGATTGGCAGGTTGGCGCGCCCCCACCGTAGGC
TGGGACGGGTGGATACCGAT

Downstream 100 bases:

>100_bases
GCGGGCCGAATTGGGCCGTCGGACAGCCTTCTCATAATCCGGCGAATAGGCTGGTAATGGACTTAACCACGGATCAAGGA
AGAACGTAGAGTGCAGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MLDVDTARRRIVDLTDAVRAFCTAHDDGLCNVFVPHATAGVAIIETGAGSDEDLVDTLVRLLPRDDRYRHAHGSYGHGAD
HLLPAFVAPSVTVPVSGGQPLLGTWQSIVLVDLNQDNPRRSVRLSFVEG

Sequences:

>Translated_129_residues
MLDVDTARRRIVDLTDAVRAFCTAHDDGLCNVFVPHATAGVAIIETGAGSDEDLVDTLVRLLPRDDRYRHAHGSYGHGAD
HLLPAFVAPSVTVPVSGGQPLLGTWQSIVLVDLNQDNPRRSVRLSFVEG
>Mature_129_residues
MLDVDTARRRIVDLTDAVRAFCTAHDDGLCNVFVPHATAGVAIIETGAGSDEDLVDTLVRLLPRDDRYRHAHGSYGHGAD
HLLPAFVAPSVTVPVSGGQPLLGTWQSIVLVDLNQDNPRRSVRLSFVEG

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2556_MYCTU (P67121)

Other databases:

- EMBL:   BX842580
- EMBL:   AE000516
- PIR:   H70727
- RefSeq:   NP_217072.1
- RefSeq:   NP_337131.1
- ProteinModelPortal:   P67121
- SMR:   P67121
- EnsemblBacteria:   EBMYCT00000000508
- EnsemblBacteria:   EBMYCT00000071426
- GeneID:   887451
- GeneID:   925684
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2633
- KEGG:   mtu:Rv2556c
- TIGR:   MT2633
- TubercuList:   Rv2556c
- GeneTree:   EBGT00050000018213
- HOGENOM:   HBG409904
- OMA:   RAFCANH
- ProtClustDB:   CLSK872073
- InterPro:   IPR001602
- Gene3D:   G3DSA:2.60.120.460
- PIRSF:   PIRSF004681
- TIGRFAMs:   TIGR00149

Pfam domain/function: PF01894 UPF0047; SSF111038 UPF0047

EC number: NA

Molecular weight: Translated: 13925; Mature: 13925

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVDTARRRIVDLTDAVRAFCTAHDDGLCNVFVPHATAGVAIIETGAGSDEDLVDTLVR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHH
LLPRDDRYRHAHGSYGHGADHLLPAFVAPSVTVPVSGGQPLLGTWQSIVLVDLNQDNPRR
HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCC
SVRLSFVEG
EEEEEEECC
>Mature Secondary Structure
MLDVDTARRRIVDLTDAVRAFCTAHDDGLCNVFVPHATAGVAIIETGAGSDEDLVDTLVR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHH
LLPRDDRYRHAHGSYGHGADHLLPAFVAPSVTVPVSGGQPLLGTWQSIVLVDLNQDNPRR
HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCC
SVRLSFVEG
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036