| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823651
Identifier: 148823651
GI number: 148823651
Start: 2766336
End: 2766902
Strand: Reverse
Name: 148823651
Synonym: TBFG_12476
Alternate gene names: NA
Gene position: 2766902-2766336 (Counterclockwise)
Preceding gene: 148823653
Following gene: 148823650
Centisome position: 62.54
GC content: 70.19
Gene sequence:
>567_bases ATGCCCGTGGGTTGGCTTTGGCGCGCGCGCACCGCGAAAGGAACAACGTTGAAGAACGCCCGTACGACGCTCATCGCCGC CGCGATTGCCGGGACGTTGGTGACCACGTCACCAGCCGGTATCGCCAATGCCGACGACGCGGGCTTGGACCCAAACGCCG CAGCCGGCCCGGATGCCGTGGGCTTTGACCCGAACCTGCCGCCGGCCCCGGACGCTGCACCCGTCGATACTCCGCCGGCT CCGGAGGACGCGGGCTTTGATCCCAACCTCCCCCCGCCGCTGGCCCCGGACTTCCTGTCCCCGCCTGCGGAGGAAGCGCC TCCCGTGCCCGTGGCCTACAGCGTGAACTGGGACGCGATCGCGCAGTGCGAGTCCGGTGGAAACTGGTCGATCAACACCG GTAACGGTTACTACGGCGGCCTGCAGTTCACCGCCGGCACCTGGCGTGCCAACGGTGGCTCGGGGTCCGCGGCCAACGCG AGCCGGGAGGAGCAGATCCGGGTGGCTGAGAACGTGCTGCGTTCGCAGGGTATCCGCGCCTGGCCGGTCTGCGGCCGCCG CGGCTGA
Upstream 100 bases:
>100_bases GGCTAGCAGCCGCGCCGGGCAGATCAAGCGCTCCGCTGCCGTGCCGGACCGAGACGGCACGTCCCACGCAGCACCCTCGA ATGCACCTGGCAGCTAACCC
Downstream 100 bases:
>100_bases CCACCGCGAAAAGACGCAAAAGCTCCCAAATCCGGTCGGATTTGGGAGCTTTTGCGTCTGCTCGCGCACCCCGGAGTAGC GTCAAACCCGTGACCGCTAC
Product: resuscitation-promoting factor rpfE
Products: NA
Alternate protein names: Transglycosylase Domain-Containing Protein; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfA; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; Transglycosylase Family Protein; M23 Family Secreted Peptidase; Resuscitation-Promoting Factor RpfC; Transglycosylase-Like Domain Protein; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfE; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Secreted Esterase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; FHA Domain-Containing Protein; Cell Wall Function Protein; Resuscitation-Promoting Factor Rpfc; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; Resuscitation-Promoting Factor Rpfd; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; Cell Wall Catabolism Protein; Transglycosylase-Like Domain-Containing Protein; Lipoprotein; M24/M37 Family Peptidase
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAVGFDPNLPPAPDAAPVDTPPA PEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANA SREEQIRVAENVLRSQGIRAWPVCGRRG
Sequences:
>Translated_188_residues MPVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAVGFDPNLPPAPDAAPVDTPPA PEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANA SREEQIRVAENVLRSQGIRAWPVCGRRG >Mature_187_residues PVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAVGFDPNLPPAPDAAPVDTPPAP EDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANAS REEQIRVAENVLRSQGIRAWPVCGRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19223; Mature: 19092
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAV CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC GFDPNLPPAPDAAPVDTPPAPEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCHHHE AQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANASREEQIRVAENVLRSQGIRA EEECCCCCEEEECCCCEECCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE WPVCGRRG CCCCCCCC >Mature Secondary Structure PVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAV CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC GFDPNLPPAPDAAPVDTPPAPEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCHHHE AQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANASREEQIRVAENVLRSQGIRA EEECCCCCEEEECCCCEECCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE WPVCGRRG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA