Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148823651

Identifier: 148823651

GI number: 148823651

Start: 2766336

End: 2766902

Strand: Reverse

Name: 148823651

Synonym: TBFG_12476

Alternate gene names: NA

Gene position: 2766902-2766336 (Counterclockwise)

Preceding gene: 148823653

Following gene: 148823650

Centisome position: 62.54

GC content: 70.19

Gene sequence:

>567_bases
ATGCCCGTGGGTTGGCTTTGGCGCGCGCGCACCGCGAAAGGAACAACGTTGAAGAACGCCCGTACGACGCTCATCGCCGC
CGCGATTGCCGGGACGTTGGTGACCACGTCACCAGCCGGTATCGCCAATGCCGACGACGCGGGCTTGGACCCAAACGCCG
CAGCCGGCCCGGATGCCGTGGGCTTTGACCCGAACCTGCCGCCGGCCCCGGACGCTGCACCCGTCGATACTCCGCCGGCT
CCGGAGGACGCGGGCTTTGATCCCAACCTCCCCCCGCCGCTGGCCCCGGACTTCCTGTCCCCGCCTGCGGAGGAAGCGCC
TCCCGTGCCCGTGGCCTACAGCGTGAACTGGGACGCGATCGCGCAGTGCGAGTCCGGTGGAAACTGGTCGATCAACACCG
GTAACGGTTACTACGGCGGCCTGCAGTTCACCGCCGGCACCTGGCGTGCCAACGGTGGCTCGGGGTCCGCGGCCAACGCG
AGCCGGGAGGAGCAGATCCGGGTGGCTGAGAACGTGCTGCGTTCGCAGGGTATCCGCGCCTGGCCGGTCTGCGGCCGCCG
CGGCTGA

Upstream 100 bases:

>100_bases
GGCTAGCAGCCGCGCCGGGCAGATCAAGCGCTCCGCTGCCGTGCCGGACCGAGACGGCACGTCCCACGCAGCACCCTCGA
ATGCACCTGGCAGCTAACCC

Downstream 100 bases:

>100_bases
CCACCGCGAAAAGACGCAAAAGCTCCCAAATCCGGTCGGATTTGGGAGCTTTTGCGTCTGCTCGCGCACCCCGGAGTAGC
GTCAAACCCGTGACCGCTAC

Product: resuscitation-promoting factor rpfE

Products: NA

Alternate protein names: Transglycosylase Domain-Containing Protein; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfA; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; Transglycosylase Family Protein; M23 Family Secreted Peptidase; Resuscitation-Promoting Factor RpfC; Transglycosylase-Like Domain Protein; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfE; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Secreted Esterase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; FHA Domain-Containing Protein; Cell Wall Function Protein; Resuscitation-Promoting Factor Rpfc; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; Resuscitation-Promoting Factor Rpfd; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; Cell Wall Catabolism Protein; Transglycosylase-Like Domain-Containing Protein; Lipoprotein; M24/M37 Family Peptidase

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAVGFDPNLPPAPDAAPVDTPPA
PEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANA
SREEQIRVAENVLRSQGIRAWPVCGRRG

Sequences:

>Translated_188_residues
MPVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAVGFDPNLPPAPDAAPVDTPPA
PEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANA
SREEQIRVAENVLRSQGIRAWPVCGRRG
>Mature_187_residues
PVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAVGFDPNLPPAPDAAPVDTPPAP
EDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAIAQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANAS
REEQIRVAENVLRSQGIRAWPVCGRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19223; Mature: 19092

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAV
CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC
GFDPNLPPAPDAAPVDTPPAPEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCHHHE
AQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANASREEQIRVAENVLRSQGIRA
EEECCCCCEEEECCCCEECCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
WPVCGRRG
CCCCCCCC
>Mature Secondary Structure 
PVGWLWRARTAKGTTLKNARTTLIAAAIAGTLVTTSPAGIANADDAGLDPNAAAGPDAV
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCC
GFDPNLPPAPDAAPVDTPPAPEDAGFDPNLPPPLAPDFLSPPAEEAPPVPVAYSVNWDAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCHHHE
AQCESGGNWSINTGNGYYGGLQFTAGTWRANGGSGSAANASREEQIRVAENVLRSQGIRA
EEECCCCCEEEECCCCEECCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
WPVCGRRG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA