| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823650
Identifier: 148823650
GI number: 148823650
Start: 2764987
End: 2766246
Strand: Reverse
Name: 148823650
Synonym: TBFG_12475
Alternate gene names: NA
Gene position: 2766246-2764987 (Counterclockwise)
Preceding gene: 148823651
Following gene: 148823649
Centisome position: 62.52
GC content: 68.41
Gene sequence:
>1260_bases GTGACCGCTACGCCGCGTGAATTCGACATCGTGTTGTACGGGGCGACCGGCTTCGTCGGCAAGCTGACCGCCGAATACCT GGCCCGGGCCGGGGGAGATGCCCGGATCGCGCTGGCCGGCAGGTCGACGCAACGGGTGCTCGCCGTTCGCGAAGCCCTGG GCGAATCCGCGCAGACCTGGCCGATCCTGACCGCCGACGCGTCGTTGCCGTCGACGCTGCAAGCCATGGCCGCCCGCGCC CAGGTCGTGGTCACCACCGTTGGGCCCTACACCCGCTACGGGCTGCCGCTGGTGGCCGCATGCGCTGCCGCCGGCACCGA CTACGCCGACCTGACCGGCGAGCCGATGTTCATGCGCAACAGCATCGACTTGTACCACAAGCAGGCCGCCGACACCGGTG CACGCATCGTGCACGCCTGCGGATTCGACTCCGTCCCATCTGATCTGAGCGTGTACGCCCTATACCACGCGGCACGAGAA GACGGCGCCGGCGAGCTGACCGACACCAACTGCGTGGTGCGTTCCTTCAAAGGCGGGTTCTCCGGCGGCACCATCGCATC GATGCTGGAGGTGTTGAGCACCGCTTCTAACGATCCCGATGCGCGCCGCCAGCTATCCGACCCCTACATGCTGAGCCCAG ACCGCGGCGCCGAACCCGAACTGGGCCCACAGCCTGACCTGCCGTCGCGTCGTGGCCGTCGGCTCGCGCCGGAACTGGCC GGTGTGTGGACCGCGGGATTCATCATGGCGCCCACCAACACCCGGATCGTGCGCCGCAGCAACGCGCTCCTGGACTGGGC CTACGGCCGGCGGTTCCGCTACAGCGAAACCATGAGCGTAGGGTCCACGGTGCTGGCGCCGGTGGTATCGGTTGTCGGCG GCGGTGTCGGCAACGCGATGTTCGGCTTGGCCAGCCGCTACATCCGCCTGCTGCCGCGGGGACTGGTAAAGCGTGTCGTC CCCAAACCCGGCACCGGCCCCAGTGCGGCGGCTCGCGAGCGCGGCTACTACCGCATCGAGACCTACACCACCACAACCAC CGGAGCCCGGTACCTGGCGCGCATGGCCCAAGATGGTGACCCCGGCTACAAGGCGACGTCGGTGTTGTTGGGGGAGTGTG GTCTGGCGCTGGCACTGGATCGCGACAAGCTGTCCGACATGCGTGGTGTGTTAACCCCCGCGGCCGCAATGGGTGACGCC CTGCTGGAGCGTTTGCCGGCCGCCGGTGTGTCGCTGCAGACCACGCGACTGGCTAGCTGA
Upstream 100 bases:
>100_bases GCCGCGGCTGACCACCGCGAAAAGACGCAAAAGCTCCCAAATCCGGTCGGATTTGGGAGCTTTTGCGTCTGCTCGCGCAC CCCGGAGTAGCGTCAAACCC
Downstream 100 bases:
>100_bases ATCCGGGCGGTTTCGGGCGCTTTCATGCCGGTGTGAAGCGGTTCCTAGAATTGATCGGTGACCGCCAGCCCTCACCCTGC CGCCGATATGCTGCCCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTWPILTADASLPSTLQAMAARA QVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAARE DGAGELTDTNCVVRSFKGGFSGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFRYSETMSVGSTVLAPVVSVVGGGVGNAMFGLASRYIRLLPRGLVKRVV PKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDA LLERLPAAGVSLQTTRLAS
Sequences:
>Translated_419_residues MTATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTWPILTADASLPSTLQAMAARA QVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAARE DGAGELTDTNCVVRSFKGGFSGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFRYSETMSVGSTVLAPVVSVVGGGVGNAMFGLASRYIRLLPRGLVKRVV PKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDA LLERLPAAGVSLQTTRLAS >Mature_418_residues TATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTWPILTADASLPSTLQAMAARAQ VVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAARED GAGELTDTNCVVRSFKGGFSGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELAG VWTAGFIMAPTNTRIVRRSNALLDWAYGRRFRYSETMSVGSTVLAPVVSVVGGGVGNAMFGLASRYIRLLPRGLVKRVVP KPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDAL LERLPAAGVSLQTTRLAS
Specific function: Unknown
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily
Homologues:
Organism=Homo sapiens, GI55770836, Length=456, Percent_Identity=27.4122807017544, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI32567112, Length=201, Percent_Identity=32.8358208955224, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17560066, Length=201, Percent_Identity=32.8358208955224, Blast_Score=111, Evalue=8e-25, Organism=Caenorhabditis elegans, GI71991033, Length=154, Percent_Identity=34.4155844155844, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646278, Length=438, Percent_Identity=27.1689497716895, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24644140, Length=429, Percent_Identity=27.2727272727273, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24644142, Length=429, Percent_Identity=27.2727272727273, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI21356081, Length=429, Percent_Identity=27.2727272727273, Blast_Score=112, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2449_MYCTU (O53176)
Other databases:
- EMBL: BX842579 - PIR: H70863 - RefSeq: NP_216965.1 - ProteinModelPortal: O53176 - EnsemblBacteria: EBMYCT00000000537 - GeneID: 885894 - GenomeReviews: AL123456_GR - KEGG: mtu:Rv2449c - TubercuList: Rv2449c - GeneTree: EBGT00050000017653 - HOGENOM: HBG527018 - OMA: GYGSTSK - ProtClustDB: CLSK872065 - GO: GO:0005488 - InterPro: IPR016040 - InterPro: IPR005097 - Gene3D: G3DSA:3.40.50.720
Pfam domain/function: PF03435 Saccharop_dh
EC number: NA
Molecular weight: Translated: 44379; Mature: 44248
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1bfec20c)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTW CCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRN EEEEECCCCHHHHHHHHHCCEEEEEECCCHHHHCHHHHHHHHHCCCCHHHCCCCCEEEEC SIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAAREDGAGELTDTNCVVRSFKGGF CHHHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC SGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA CCCHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFRYSETMSVGSTVLAPVVSVVGGGVGNAM HHHHCCEEECCCCCEEEECCCCEEEHHCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHH FGLASRYIRLLPRGLVKRVVPKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGD HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCC PGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDALLERLPAAGVSLQTTRLAS CCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH >Mature Secondary Structure TATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTW CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRN EEEEECCCCHHHHHHHHHCCEEEEEECCCHHHHCHHHHHHHHHCCCCHHHCCCCCEEEEC SIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAAREDGAGELTDTNCVVRSFKGGF CHHHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC SGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA CCCHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFRYSETMSVGSTVLAPVVSVVGGGVGNAM HHHHCCEEECCCCCEEEECCCCEEEHHCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHH FGLASRYIRLLPRGLVKRVVPKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGD HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCC PGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDALLERLPAAGVSLQTTRLAS CCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230