Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148823598

Identifier: 148823598

GI number: 148823598

Start: 2704725

End: 2706728

Strand: Direct

Name: 148823598

Synonym: TBFG_12423

Alternate gene names: NA

Gene position: 2704725-2706728 (Clockwise)

Preceding gene: 148823597

Following gene: 148823599

Centisome position: 61.13

GC content: 63.92

Gene sequence:

>2004_bases
ATGTCCGGTGCCACGGTGGGTGCGCGCGAAATCACCATCCGCGGAGTCGTCCTGGGCGCATTGATTACCTTGGTGTTCAC
CGCGGCCAACGTGTACCTGGGGCTAAGGGTTGGATTGACATTCGCCACTTCCATACCGGCCGCGGTGATCTCGATGGGCG
TGCTGCGGTTGTTCGCCAACCACTCAGTGGTGGAGAACAATATTGTTCAGACGATCGCGTCGGCGGCCGGCACGCTGTCG
TCGATCATCTTCGTGTTACCGGCACTGCTCATGATCGGCTGGTGGAGCGGGTTTCCGTACTGGACAACGGCGGCGGTGTG
TGCACTGGGCGGGATCCTTGGCGTCATGTACTCAATTCCGTTGCGCCGCGCACTCGTCACCGGATCAGACCTGCCGTACC
CAGAAGGCGTTGCCGGAGCCGAGGTTCTCAAGATCGGTGACTCCGCACGGGAGATGGAGCACAACCGTAGGGGAATTGGG
GTAATCGCCCTGGGCGCGGCAGCGGCGGCGGGATATGCACTGCTGGCATCCCTGCGGGTGATCAACAACTCACTGTCGGC
CACCTTCCGAGTAGGTTCCGGTGCGACGATGATCGGTGCCAGCTTGTCGCTGGCGTTGATCGGCGTCGGTCATCTTGTTG
GCGTCACCGTCGGTGTCGCAATGATCGTCGGATTGGCTATCGCCTTTGGGGTAATGCTGCCAATACGGACAGCCGGCCAA
CTGCCGCCGGACGGGGACTACGCCGTCGCCGTCGCCAGAATTTTCTCGACGGACGTGCGGTTCATCGGGGCGGGCGCCAT
TGCGGTGGCGGCCGCCTGGACGTTCTTGAAGATCCTGGGGCCGATTCTGCGTGGCATCGCCGACGCCGCGGTCTCAGCTC
GAACCCGACGCCGAGGGCAAGCGGTTGGCCAGACCGAGCGCGACATCCCGATCCACATCGTGGCCATGGTGGTTCTTCTC
TCGCTGATCCCAATCGGATGGCTGCTCGCGGACTTTACCGACGGGACACCGCTCGATGACCGCAGGCCCGGCGCCATCGC
CGCCGGGGTACTGCTCGTCTTGGTCATCGGGTTGATGGTCGCTGCGGTCTGCGGTTACATGGCCGGGTTGATCGGCTCGT
CGAACAGCCCGATCTCGGGCGTGGGCATTCTGGTGGTGGTGCTGGCCGGTCTGCTGATCAAGACTGCGTATGGTCCGGCC
ACCGGCTCGCAGATTCCGGCCCTGGTGGCCTACACCGTGTTTACCGCTGCATTGGTCTTCGGCGTGGCGACTATTTCCAA
CGACAATCTGCAGGACCTCAAAACCGGCCAACTCGTCGGCGCTACCCCATGGAAGCAGCAGGTTGCACTGATCATCGGCG
TGCTCGTCGGGTCGGTGGTGATGGCGCCGATCCTGCAGCTGATGCAGGCTGGATTCGGGTTCCAGGGGGCGCCGGGCGCA
ACGGCCAACGCATTGGCCGCCCCGCAAGCCGCGCTCATGTCCGCGCTGGCCAAGGGAGTATTTGGTGGCTCGCTGAACTG
GTCGCTGGTCGGTGTAGGGGCCTTGACCGGCGTGATAGCGGTCGCGCTCGACGAGACACTGGCCAAGACGACAACCAACC
TTCGGCTGCCGCCACTAGCGGTGGGTATGGGTATGTACCTGTCGGCCGCACTGACGCTGATGATCCCGATCGGCGCATTC
CTCGGGCGGATCTATGACTCCTGGGCGCGGTGGTCTGGGGATGACGACGAGCGCAAGAAACGGTTGGGCGTCATGCTCGC
GACGGGCCTGATTGTGGGCGAAAGCCTATACGGGGTGCTCTTTGCCGTCATCGTCGCGACAACTGGCAAAGAGGAGCCGC
TGGCCATGGTCGGCGACGGATTCAGGTTTGCCTCCCAGCCGCTGGGAGCCATCGTCTTTGCCGGCCTCCTCGCTTGGCTC
TACCAGCGCACCCGGGTCACAGCGTCGTACCGGCTGGCAGCGCCGGCCGGCAGCTCCAAGCCACTGCCCGATTTGCCTGG
GTAA

Upstream 100 bases:

>100_bases
CGGACCACTTCGAGCCGATAATTTTGCCGGCCCTCTCGGGCTTTGTCTGCGGTTTTACCGGCTCGGTGCATTCGCGCGCT
AGCCGATAGGGTCTATCGCC

Downstream 100 bases:

>100_bases
CCGCATTGCGCCCGAGGGGTCCGGCTTTTCACAGCAACTTCACGGTTGACATCCACCTTGGCTCGCAGCTCTGCGAGGCA
GCCTGAGGTGACAAAGCCGG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MSGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFANHSVVENNIVQTIASAAGTLS
SIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIG
VIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ
LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLL
SLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPA
TGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA
TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLSAALTLMIPIGAF
LGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWL
YQRTRVTASYRLAAPAGSSKPLPDLPG

Sequences:

>Translated_667_residues
MSGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFANHSVVENNIVQTIASAAGTLS
SIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIG
VIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ
LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLL
SLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPA
TGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA
TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLSAALTLMIPIGAF
LGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWL
YQRTRVTASYRLAAPAGSSKPLPDLPG
>Mature_666_residues
SGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFANHSVVENNIVQTIASAAGTLSS
IIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIGV
IALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQL
PPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLLS
LIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPAT
GSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGAT
ANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLSAALTLMIPIGAFL
GRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWLY
QRTRVTASYRLAAPAGSSKPLPDLPG

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 68253; Mature: 68121

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFAN
CCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HSVVENNIVQTIASAAGTLSSIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIGVIALGAAAAAGYALLASLRV
HHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH
INNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQ
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGQTERDIPIHIVAMVVLLSLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMV
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPATGSQIPALVAYTVFTAALVF
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA
HHHHCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLA
CCHHHHCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VGMGMYLSAALTLMIPIGAFLGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWLYQRTRVTASYRLAAPAGSSK
HHHHHHCCCCCCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC
PLPDLPG
CCCCCCC
>Mature Secondary Structure 
SGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFAN
CCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HSVVENNIVQTIASAAGTLSSIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIGVIALGAAAAAGYALLASLRV
HHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH
INNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ
HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQ
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGQTERDIPIHIVAMVVLLSLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMV
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPATGSQIPALVAYTVFTAALVF
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA
HHHHCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLA
CCHHHHCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VGMGMYLSAALTLMIPIGAFLGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWLYQRTRVTASYRLAAPAGSSK
HHHHHHCCCCCCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC
PLPDLPG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]