| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823598
Identifier: 148823598
GI number: 148823598
Start: 2704725
End: 2706728
Strand: Direct
Name: 148823598
Synonym: TBFG_12423
Alternate gene names: NA
Gene position: 2704725-2706728 (Clockwise)
Preceding gene: 148823597
Following gene: 148823599
Centisome position: 61.13
GC content: 63.92
Gene sequence:
>2004_bases ATGTCCGGTGCCACGGTGGGTGCGCGCGAAATCACCATCCGCGGAGTCGTCCTGGGCGCATTGATTACCTTGGTGTTCAC CGCGGCCAACGTGTACCTGGGGCTAAGGGTTGGATTGACATTCGCCACTTCCATACCGGCCGCGGTGATCTCGATGGGCG TGCTGCGGTTGTTCGCCAACCACTCAGTGGTGGAGAACAATATTGTTCAGACGATCGCGTCGGCGGCCGGCACGCTGTCG TCGATCATCTTCGTGTTACCGGCACTGCTCATGATCGGCTGGTGGAGCGGGTTTCCGTACTGGACAACGGCGGCGGTGTG TGCACTGGGCGGGATCCTTGGCGTCATGTACTCAATTCCGTTGCGCCGCGCACTCGTCACCGGATCAGACCTGCCGTACC CAGAAGGCGTTGCCGGAGCCGAGGTTCTCAAGATCGGTGACTCCGCACGGGAGATGGAGCACAACCGTAGGGGAATTGGG GTAATCGCCCTGGGCGCGGCAGCGGCGGCGGGATATGCACTGCTGGCATCCCTGCGGGTGATCAACAACTCACTGTCGGC CACCTTCCGAGTAGGTTCCGGTGCGACGATGATCGGTGCCAGCTTGTCGCTGGCGTTGATCGGCGTCGGTCATCTTGTTG GCGTCACCGTCGGTGTCGCAATGATCGTCGGATTGGCTATCGCCTTTGGGGTAATGCTGCCAATACGGACAGCCGGCCAA CTGCCGCCGGACGGGGACTACGCCGTCGCCGTCGCCAGAATTTTCTCGACGGACGTGCGGTTCATCGGGGCGGGCGCCAT TGCGGTGGCGGCCGCCTGGACGTTCTTGAAGATCCTGGGGCCGATTCTGCGTGGCATCGCCGACGCCGCGGTCTCAGCTC GAACCCGACGCCGAGGGCAAGCGGTTGGCCAGACCGAGCGCGACATCCCGATCCACATCGTGGCCATGGTGGTTCTTCTC TCGCTGATCCCAATCGGATGGCTGCTCGCGGACTTTACCGACGGGACACCGCTCGATGACCGCAGGCCCGGCGCCATCGC CGCCGGGGTACTGCTCGTCTTGGTCATCGGGTTGATGGTCGCTGCGGTCTGCGGTTACATGGCCGGGTTGATCGGCTCGT CGAACAGCCCGATCTCGGGCGTGGGCATTCTGGTGGTGGTGCTGGCCGGTCTGCTGATCAAGACTGCGTATGGTCCGGCC ACCGGCTCGCAGATTCCGGCCCTGGTGGCCTACACCGTGTTTACCGCTGCATTGGTCTTCGGCGTGGCGACTATTTCCAA CGACAATCTGCAGGACCTCAAAACCGGCCAACTCGTCGGCGCTACCCCATGGAAGCAGCAGGTTGCACTGATCATCGGCG TGCTCGTCGGGTCGGTGGTGATGGCGCCGATCCTGCAGCTGATGCAGGCTGGATTCGGGTTCCAGGGGGCGCCGGGCGCA ACGGCCAACGCATTGGCCGCCCCGCAAGCCGCGCTCATGTCCGCGCTGGCCAAGGGAGTATTTGGTGGCTCGCTGAACTG GTCGCTGGTCGGTGTAGGGGCCTTGACCGGCGTGATAGCGGTCGCGCTCGACGAGACACTGGCCAAGACGACAACCAACC TTCGGCTGCCGCCACTAGCGGTGGGTATGGGTATGTACCTGTCGGCCGCACTGACGCTGATGATCCCGATCGGCGCATTC CTCGGGCGGATCTATGACTCCTGGGCGCGGTGGTCTGGGGATGACGACGAGCGCAAGAAACGGTTGGGCGTCATGCTCGC GACGGGCCTGATTGTGGGCGAAAGCCTATACGGGGTGCTCTTTGCCGTCATCGTCGCGACAACTGGCAAAGAGGAGCCGC TGGCCATGGTCGGCGACGGATTCAGGTTTGCCTCCCAGCCGCTGGGAGCCATCGTCTTTGCCGGCCTCCTCGCTTGGCTC TACCAGCGCACCCGGGTCACAGCGTCGTACCGGCTGGCAGCGCCGGCCGGCAGCTCCAAGCCACTGCCCGATTTGCCTGG GTAA
Upstream 100 bases:
>100_bases CGGACCACTTCGAGCCGATAATTTTGCCGGCCCTCTCGGGCTTTGTCTGCGGTTTTACCGGCTCGGTGCATTCGCGCGCT AGCCGATAGGGTCTATCGCC
Downstream 100 bases:
>100_bases CCGCATTGCGCCCGAGGGGTCCGGCTTTTCACAGCAACTTCACGGTTGACATCCACCTTGGCTCGCAGCTCTGCGAGGCA GCCTGAGGTGACAAAGCCGG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 667; Mature: 666
Protein sequence:
>667_residues MSGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFANHSVVENNIVQTIASAAGTLS SIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIG VIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLL SLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPA TGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLSAALTLMIPIGAF LGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWL YQRTRVTASYRLAAPAGSSKPLPDLPG
Sequences:
>Translated_667_residues MSGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFANHSVVENNIVQTIASAAGTLS SIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIG VIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLL SLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPA TGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLSAALTLMIPIGAF LGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWL YQRTRVTASYRLAAPAGSSKPLPDLPG >Mature_666_residues SGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFANHSVVENNIVQTIASAAGTLSS IIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIPLRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIGV IALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQL PPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLLS LIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPAT GSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGAT ANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLSAALTLMIPIGAFL GRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWLY QRTRVTASYRLAAPAGSSKPLPDLPG
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 68253; Mature: 68121
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFAN CCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HSVVENNIVQTIASAAGTLSSIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIGVIALGAAAAAGYALLASLRV HHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH INNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQ CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGQTERDIPIHIVAMVVLLSLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMV HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPATGSQIPALVAYTVFTAALVF HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA HHHHCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLA CCHHHHCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VGMGMYLSAALTLMIPIGAFLGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWLYQRTRVTASYRLAAPAGSSK HHHHHHCCCCCCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC PLPDLPG CCCCCCC >Mature Secondary Structure SGATVGAREITIRGVVLGALITLVFTAANVYLGLRVGLTFATSIPAAVISMGVLRLFAN CCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HSVVENNIVQTIASAAGTLSSIIFVLPALLMIGWWSGFPYWTTAAVCALGGILGVMYSIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LRRALVTGSDLPYPEGVAGAEVLKIGDSAREMEHNRRGIGVIALGAAAAAGYALLASLRV HHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH INNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGVMLPIRTAGQ HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQ CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGQTERDIPIHIVAMVVLLSLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMV HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AAVCGYMAGLIGSSNSPISGVGILVVVLAGLLIKTAYGPATGSQIPALVAYTVFTAALVF HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAGFGFQGAPGA HHHHCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLA CCHHHHCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VGMGMYLSAALTLMIPIGAFLGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAVIVATTGKEEPLAMVGDGFRFASQPLGAIVFAGLLAWLYQRTRVTASYRLAAPAGSSK HHHHHHCCCCCCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC PLPDLPG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]