Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148823445

Identifier: 148823445

GI number: 148823445

Start: 2521587

End: 2522402

Strand: Direct

Name: 148823445

Synonym: TBFG_12266

Alternate gene names: NA

Gene position: 2521587-2522402 (Clockwise)

Preceding gene: 148823443

Following gene: 148823449

Centisome position: 56.99

GC content: 65.07

Gene sequence:

>816_bases
ATGAAGCGGCCAGCTACCCGGGTTGCCGACCTGTTGAACCCGGCGGCAATGTTGTTGCCGGCAGCGAATGTCATCATGCA
GCTGGCAGTGCCGGGTGTCGGGTATGGCGTGCTGGAAAGCCCGGTGGACAGCGGCAACGTCTACAAGCATCCGTTCAAGC
GGGCCCGGACCACCGGCACCTACCTGGCGGTGGCGACCATCGGGACGGAATCCGACCGAGCGCTGATCCGGGGTGCCGTG
GACGTCGCGCACCGGCAGGTTCGGTCGACGGCCTCGAGCCCGGTGTCCTATAACGCCTTCGACCCGAAGTTGCAGCTGTG
GGTGGCGGCGTGTCTGTACCGCTACTTCGTGGACCAGCACGAGTTTCTGTACGGCCCACTCGAAGATGCCACCGCCGACG
CCGTCTACCAAGACGCCAAACGGTTAGGGACCACGCTGCAGGTGCCGGAGGGGATGTGGCCGCCGGACCGGGTCGCGTTC
GACGAGTACTGGAAGCGCTCGCTTGATGGGCTGCAGATCGACGCGCCGGTGCGCGAGCATCTTCGCGGGGTGGCCTCGGT
AGCGTTTCTCCCGTGGCCGTTGCGCGCGGTGGCCGGGCCGTTCAACCTGTTTGCGACGACGGGATTCTTGGCACCGGAGT
TCCGCGCGATGATGCAGCTGGAGTGGTCACAGGCCCAGCAGCGTCGCTTCGAGTGGTTACTTTCCGTGCTACGGTTAGCC
GACCGGCTGATTCCGCATCGGGCCTGGATCTTCGTTTACCAGCTTTACTTGTGGGACATGCGGTTTCGCGCCCGACACGG
CCGCCGAATCGTCTGA

Upstream 100 bases:

>100_bases
CCGACGGCCCTGGTCTGCCAGGTCGATGCAAACACTCCGGCAGCGTCGCACACGTGGTCTACGCTCAGCTATTTATGACC
TCATACGGCAGCTATCCACG

Downstream 100 bases:

>100_bases
TAGAGCCCGGCCGAGTGTGAGCCTGACAGCCCGACACCGGCGGCGTGTGTCGCGTCGCCAGGTTCACGCTCGGCGATCTA
GAGCCGCCGAAAACCTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV
DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF
DEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA
DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV

Sequences:

>Translated_271_residues
MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV
DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF
DEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA
DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV
>Mature_271_residues
MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV
DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF
DEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA
DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV

Specific function: Unknown

COG id: COG3662

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018713 [H]

Pfam domain/function: PF09995 DUF2236 [H]

EC number: NA

Molecular weight: Translated: 30774; Mature: 30774

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCC
YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQH
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
EFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREH
HHHCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHH
LRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA
HHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCC
YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQH
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
EFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREH
HHHCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHH
LRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA
HHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]