Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148823228

Identifier: 148823228

GI number: 148823228

Start: 2268778

End: 2269398

Strand: Direct

Name: 148823228

Synonym: TBFG_12045

Alternate gene names: NA

Gene position: 2268778-2269398 (Clockwise)

Preceding gene: 148823227

Following gene: 148823229

Centisome position: 51.28

GC content: 71.01

Gene sequence:

>621_bases
GTGTCGATCGTCGATGCGCGTGGGCGCGAGGTTCGCCGCGCCACGATCGAGCACAACGCCGCCGGACTGCGCGAGCTGCT
CGAGCTGCTGAGCCGGGCCGGTGCCCGCGAGGTCGCCATCGAACGCCCGGACGGCCCGGTCGTGGATACCCTGCTCGAGG
CCGGGATCACGGTGGTGGTGATCAGCCCCAACCAGCTGAAGAATCTGCGCGGTCGTTACGGCTCGGCTGGCAACAAGGAC
GACCGGTTCGACGCGTTCGTGCTCGCCGACACGTTGCGCACCGACCGGTCCCGGCTGCGCCCCCTGCTGCCCGACACCCC
GGCCACGGCCACCCTGCGCCGGACCTGCCGCCCCCGCAAAGACCTCGTCGCCCACCGGGTTGCGTTGGCCAATCAGCTGC
GCGCGCACCTGCGCGTCGTCTTTCCGGGTGTGGTCGGGTTGTTCGCTGACCTTGACTCGCCGATCAGCCTCGCGTTTTTG
ACGTTTTTGCCCCGTTTCGACTGCCAGGACCGCGCGGACTGGCTGTCGGTCAAGCGCCTGGCCGGCTGGCTGGCCGCCGC
TGGCTACTGCGGCCGTGCTCCACGACCGGCTCACCGGTGCCCCGCGCGGCGCCACCGGTGA

Upstream 100 bases:

>100_bases
GACGAGCGCCGAACAGTGAGCGGCCCAAACCACTACCCTGCCCGACGAGCCGCGGAACGGCGTCACGGGTGGAATCGATT
GGGCGCGAGATGATCACGCG

Downstream 100 bases:

>100_bases
CGAGGGTGCCGCCAACGCCCACATCACCCGGGCCATGGTCGCCGCGCTCACCAGCGTCGCGACCCAGATCAAGACGCTCG
ACGCGCAGATCGCCGAACAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKD
DRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFL
TFLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR

Sequences:

>Translated_206_residues
MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKD
DRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFL
TFLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
>Mature_205_residues
SIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDD
RFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLT
FLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002525 [H]

Pfam domain/function: PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 22868; Mature: 22737

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEE
ISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRK
ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH
DLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFDCQDRADWLSVKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
AGWLAAAGYCGRAPRPAHRCPARRHR
HHHHHHHHCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure 
SIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEE
ISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRK
ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH
DLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFDCQDRADWLSVKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
AGWLAAAGYCGRAPRPAHRCPARRHR
HHHHHHHHCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]