| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823201
Identifier: 148823201
GI number: 148823201
Start: 2239280
End: 2239708
Strand: Direct
Name: 148823201
Synonym: TBFG_12018
Alternate gene names: NA
Gene position: 2239280-2239708 (Clockwise)
Preceding gene: 148823200
Following gene: 148823202
Centisome position: 50.61
GC content: 59.91
Gene sequence:
>429_bases ATGGCCGGACTGAACATTTACGTGAGGCGCTGGCGGACAGCGCTTCACGCAACCGTGTCGGCATTGATAGTTGCCATCCT CGGACTCGCCATCACCCCGGTCGCTAATGCGGCGACGGCCAGGGCGACGTTGTCGGTGACATCGACGTGGCAGACCGGTT TCATCGCCCGCTTCACCATCACAAACTCGAGCACGGCGCCGCTAACCGATTGGAAGCTTGAATTCGACTTGCCGGCAGGA GAATCCGTCTTGCACACATGGAATAGCACCGTTGCACGATCTGGCACGCACTACGTTCTCAGCCCAGCGAATTGGAATCG CATCATTGCCCCCGGTGGTTCAGCCACGGGCGGCCTAAGAGGCGGGCTGACCGGTTCTTACTCGCCGCCGTCGAGTTGTC TGCTCAACGGGCAATATCCTTGCACCTAG
Upstream 100 bases:
>100_bases CGAGGCCAAATTTCATCACGGTTGCGGTTGAGCAAAGTTGCTGTAGCTTGCTCGCGAGGAGACGGCCGATATCGCCTCAT TGGCATTAGTGTTGGCTGTC
Downstream 100 bases:
>100_bases ACGCGACTGCGCACTGAGGCTCGCCGACTGCAACAATGCGGCTACTGCCAGGTGGGTCTAGTGGGTCGTCACGGCCAACG TCATCTCGGAGTTGATGCGG
Product: chitinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAGLNIYVRRWRTALHATVSALIVAILGLAITPVANAATARATLSVTSTWQTGFIARFTITNSSTAPLTDWKLEFDLPAG ESVLHTWNSTVARSGTHYVLSPANWNRIIAPGGSATGGLRGGLTGSYSPPSSCLLNGQYPCT
Sequences:
>Translated_142_residues MAGLNIYVRRWRTALHATVSALIVAILGLAITPVANAATARATLSVTSTWQTGFIARFTITNSSTAPLTDWKLEFDLPAG ESVLHTWNSTVARSGTHYVLSPANWNRIIAPGGSATGGLRGGLTGSYSPPSSCLLNGQYPCT >Mature_141_residues AGLNIYVRRWRTALHATVSALIVAILGLAITPVANAATARATLSVTSTWQTGFIARFTITNSSTAPLTDWKLEFDLPAGE SVLHTWNSTVARSGTHYVLSPANWNRIIAPGGSATGGLRGGLTGSYSPPSSCLLNGQYPCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008965 - InterPro: IPR012291 - InterPro: IPR001919 [H]
Pfam domain/function: PF00553 CBM_2 [H]
EC number: NA
Molecular weight: Translated: 14946; Mature: 14815
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLNIYVRRWRTALHATVSALIVAILGLAITPVANAATARATLSVTSTWQTGFIARFTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEE TNSSTAPLTDWKLEFDLPAGESVLHTWNSTVARSGTHYVLSPANWNRIIAPGGSATGGLR ECCCCCCCCCEEEEEECCCCCHHHHHCCCHHHCCCCEEEECCCCCCEEEECCCCCCCCCC GGLTGSYSPPSSCLLNGQYPCT CCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure AGLNIYVRRWRTALHATVSALIVAILGLAITPVANAATARATLSVTSTWQTGFIARFTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEE TNSSTAPLTDWKLEFDLPAGESVLHTWNSTVARSGTHYVLSPANWNRIIAPGGSATGGLR ECCCCCCCCCEEEEEECCCCCHHHHHCCCHHHCCCCEEEECCCCCCEEEECCCCCCCCCC GGLTGSYSPPSSCLLNGQYPCT CCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]