| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is coaBC [H]
Identifier: 148822611
GI number: 148822611
Start: 1569785
End: 1571038
Strand: Direct
Name: coaBC [H]
Synonym: TBFG_11420
Alternate gene names: 148822611
Gene position: 1569785-1571038 (Clockwise)
Preceding gene: 148822610
Following gene: 148822612
Centisome position: 35.48
GC content: 67.78
Gene sequence:
>1254_bases GTGGACCATAAACGGATCCCCAAGCAGGTAATAGTCGGTGTCTCCGGGGGCATCGCCGCCTACAAGGCGTGCACGGTTGT TCGTCAACTCACCGAGGCCAGTCATCGCGTCCGAGTCATTCCCACCGAATCCGCCCTGCGCTTCGTCGGTGCCGCGACCT TCGAGGCGCTCTCCGGTGAGCCGGTGTGCACCGACGTTTTCGCCGACGTTCCGGCGGTCCCGCATGTTCACCTCGGCCAG CAGGCCGATCTGGTCGTAGTGGCGCCGGCCACCGCCGACCTGCTGGCCCGCGCGGCGGCCGGTCGAGCCGACGATCTGCT GACCGCGACGCTGCTGACGGCGCGGTGTCCGGTGCTGTTCGCGCCGGCGATGCACACCGAGATGTGGTTGCATCCGGCCA CCGTCGACAACGTGGCCACGCTGCGCCGCCGCGGCGCGGTGGTGCTCGAGCCCGCGACAGGACGGCTTACCGGCGCCGAC AGCGGGGCCGGCCGACTGCCCGAGGCGGAGGAGATCACCACCCTCGCCCAGCTGCTGCTGGAGCGGCACGACGCCCTGCC CTACGATCTCGCGGGGCGAAAGCTGCTGGTTACCGCCGGTGGCACACGCGAGCCGATCGATCCGGTGCGCTTTATCGGCA ACCGCAGCTCCGGCAAGCAGGGCTATGCGGTGGCGCGGGTGGCCGCCCAGCGCGGCGCCGACGTTACTTTGATCGCTGGG CATACCGCAGGGCTCGTCGATCCCGCCGGCGTCGAGGTGGTGCACGTCAGCTCGGCCCAGCAACTCGCCGACGCGGTGTC CAAGCACGCTCCGACCGCCGACGTATTGGTGATGGCGGCGGCCGTCGCCGACTTCCGGCCCGCGCAGGTTGCCACCGCCA AAATCAAGAAAGGCGTCGAAGGCCCACCGACCATCGAGCTGCTGCGCAACGACGACGTGCTGGCCGGGGTGGTGCGGGCC CGAGCCCATGGACAACTGCCCAACATGCGGGCCATTGTGGGCTTCGCAGCCGAGACCGGCGACGCCAATGGCGACGTGCT CTTTCATGCCCGAGCTAAACTGCGACGCAAAGGCTGCGATCTGTTAGTCGTCAATGCCGTCGGCGAAGGCAGGGCCTTTG AGGTAGACAGCAACGACGGCTGGCTACTGGCGTCCGATGGTACCGAGTCGGCATTGCAGCACGGCTCCAAGACACTGATG GCGAGCCGTATCGTTGATGCAATCGTCACGTTCCTGGCAGGCTGTAGCAGCTAA
Upstream 100 bases:
>100_bases GCCGGGGTTGCAAGAGAAGCCGTTGTCCATCGCGTTGCGCGAGATCCACGCCGATCTGCTCGAGCACACCGAGGGCGAGT AGCAGGGCAGGCCTGAGGTG
Downstream 100 bases:
>100_bases CGGGTCCGGCGGCCGGTTCTGTACGGGTCCTGGACAGGTGCTGGACGATCCCTTGCTCGATTGGACGAGCTGAGATTGAT GCCTGAGGATATAATTCGGC
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQ QADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGAD SGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAG HTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVRA RAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLM ASRIVDAIVTFLAGCSS
Sequences:
>Translated_417_residues MDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQ QADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGAD SGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAG HTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVRA RAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLM ASRIVDAIVTFLAGCSS >Mature_417_residues MDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQ QADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGAD SGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAG HTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVRA RAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLM ASRIVDAIVTFLAGCSS
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=182, Percent_Identity=32.967032967033, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI87082301, Length=408, Percent_Identity=39.9509803921569, Blast_Score=227, Evalue=1e-60, Organism=Drosophila melanogaster, GI24657262, Length=181, Percent_Identity=27.6243093922652, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43478; Mature: 43478
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGE CCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCC PVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLF CCHHHHHHCCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEE APAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLL CCCHHHHHEECCCCHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHH ERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAG HHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEC HTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVE CCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC GPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCD CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHHHCCCC LLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS EEEEEECCCCEEEEECCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGE CCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCC PVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLF CCHHHHHHCCCCCCCEECCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEE APAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLL CCCHHHHHEECCCCHHHHHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHH ERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAG HHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEC HTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVE CCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC GPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCD CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHHHCCCC LLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS EEEEEECCCCEEEEECCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]